BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037777
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26175.3| unnamed protein product [Vitis vinifera]              125   5e-27
ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containi...   125   5e-27
ref|XP_003594127.1| Pentatricopeptide repeat-containing protein ...   112   3e-23
ref|XP_004165441.1| PREDICTED: pentatricopeptide repeat-containi...   111   7e-23
ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containi...   105   3e-21

>emb|CBI26175.3| unnamed protein product [Vitis vinifera]
          Length = 619

 Score =  125 bits (313), Expect = 5e-27
 Identities = 62/116 (53%), Positives = 81/116 (69%)
 Frame = +3

Query: 105 QWVSTISMENPARPLNRPQDHLQLFFDSRKNHKHTTSEFAIVSALKSCTSLLTIHQGEQI 284
           +WVS    + P  P+    DHL+ FF+  K+ +H+  E  +VSALKSC+SLL + QG+QI
Sbjct: 19  KWVSAAPSQLPPHPI----DHLRAFFNGNKDTQHSDYELTLVSALKSCSSLLALSQGQQI 74

Query: 285 HSFVLKSGLDSNIFIQNSLINLYVKCGFIKEARLMFDSCLRLDTASWNILIAGYVK 452
           HS V KSGL SNIF++NSLI+ YVKC  I  AR +FD+C  LD  S NI++AGYVK
Sbjct: 75  HSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFDTCSVLDPVSCNIMLAGYVK 130



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/80 (33%), Positives = 47/80 (58%)
 Frame = +3

Query: 213 SEFAIVSALKSCTSLLTIHQGEQIHSFVLKSGLDSNIFIQNSLINLYVKCGFIKEARLMF 392
           +E  IV  + +C   + + +G+Q H  ++++G D   FIQ ++I+ Y  CG I  A L F
Sbjct: 285 NEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQF 344

Query: 393 DSCLRLDTASWNILIAGYVK 452
           +   +   +SWN LI+G+V+
Sbjct: 345 ELGSKDHVSSWNALISGFVR 364


>ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
           mitochondrial [Vitis vinifera]
          Length = 694

 Score =  125 bits (313), Expect = 5e-27
 Identities = 62/116 (53%), Positives = 81/116 (69%)
 Frame = +3

Query: 105 QWVSTISMENPARPLNRPQDHLQLFFDSRKNHKHTTSEFAIVSALKSCTSLLTIHQGEQI 284
           +WVS    + P  P+    DHL+ FF+  K+ +H+  E  +VSALKSC+SLL + QG+QI
Sbjct: 19  KWVSAAPSQLPPHPI----DHLRAFFNGNKDTQHSDYELTLVSALKSCSSLLALSQGQQI 74

Query: 285 HSFVLKSGLDSNIFIQNSLINLYVKCGFIKEARLMFDSCLRLDTASWNILIAGYVK 452
           HS V KSGL SNIF++NSLI+ YVKC  I  AR +FD+C  LD  S NI++AGYVK
Sbjct: 75  HSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFDTCSVLDPVSCNIMLAGYVK 130



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/80 (33%), Positives = 47/80 (58%)
 Frame = +3

Query: 213 SEFAIVSALKSCTSLLTIHQGEQIHSFVLKSGLDSNIFIQNSLINLYVKCGFIKEARLMF 392
           +E  IV  + +C   + + +G+Q H  ++++G D   FIQ ++I+ Y  CG I  A L F
Sbjct: 315 NEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQF 374

Query: 393 DSCLRLDTASWNILIAGYVK 452
           +   +   +SWN LI+G+V+
Sbjct: 375 ELGSKDHVSSWNALISGFVR 394


>ref|XP_003594127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124365519|gb|ABN09753.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355483175|gb|AES64378.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  112 bits (280), Expect = 3e-23
 Identities = 57/114 (50%), Positives = 75/114 (65%)
 Frame = +3

Query: 111 VSTISMENPARPLNRPQDHLQLFFDSRKNHKHTTSEFAIVSALKSCTSLLTIHQGEQIHS 290
           +ST +   P      PQ  + +F ++R +  H  SE A+VSALKSC+SL  I QG QIHS
Sbjct: 23  ISTSTFTKP-----NPQHFIHIFTNARNHQNHHDSELALVSALKSCSSLSFISQGRQIHS 77

Query: 291 FVLKSGLDSNIFIQNSLINLYVKCGFIKEARLMFDSCLRLDTASWNILIAGYVK 452
            + K GL  N FIQNSLIN+Y KCG IK A+L+FD    LD+ S NI+++GYV+
Sbjct: 78  LIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGFATLDSVSCNIMVSGYVR 131



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/83 (36%), Positives = 44/83 (53%)
 Frame = +3

Query: 204 HTTSEFAIVSALKSCTSLLTIHQGEQIHSFVLKSGLDSNIFIQNSLINLYVKCGFIKEAR 383
           H  +E  IV+ + +C     I  G Q+H  V+K G D   FIQ ++I  Y  CG +  A 
Sbjct: 313 HGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLAC 372

Query: 384 LMFDSCLRLDTASWNILIAGYVK 452
           L F+  ++    SWN L AG++K
Sbjct: 373 LQFEVGVKDHLESWNALTAGFIK 395


>ref|XP_004165441.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
           mitochondrial-like isoform 1 [Cucumis sativus]
          Length = 703

 Score =  111 bits (277), Expect = 7e-23
 Identities = 59/117 (50%), Positives = 77/117 (65%), Gaps = 1/117 (0%)
 Frame = +3

Query: 105 QWVSTIS-MENPARPLNRPQDHLQLFFDSRKNHKHTTSEFAIVSALKSCTSLLTIHQGEQ 281
           +WVST S +E+  RPL     +L  F + R +      E ++VSALK C S   I  G+Q
Sbjct: 27  KWVSTFSTIESSPRPLQ----NLSSFLNGRPSSSSLDCELSVVSALKYCASSSAISSGQQ 82

Query: 282 IHSFVLKSGLDSNIFIQNSLINLYVKCGFIKEARLMFDSCLRLDTASWNILIAGYVK 452
           IH+ VLK G +SN FI NSLIN+YVKCG +  ARL+FDSC  LD+ S NI+++GYVK
Sbjct: 83  IHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFDSCSVLDSVSCNIMMSGYVK 139


>ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
           mitochondrial-like [Glycine max]
          Length = 912

 Score =  105 bits (263), Expect = 3e-21
 Identities = 56/116 (48%), Positives = 75/116 (64%)
 Frame = +3

Query: 105 QWVSTISMENPARPLNRPQDHLQLFFDSRKNHKHTTSEFAIVSALKSCTSLLTIHQGEQI 284
           +WVS  S  N +  +  PQ  + +F ++R +  H   E A+VSALK C+S     QG Q+
Sbjct: 235 KWVSFSSSTNASPHVQDPQHFIGIFCNARLHQNHYECELALVSALKYCSSS---SQGRQL 291

Query: 285 HSFVLKSGLDSNIFIQNSLINLYVKCGFIKEARLMFDSCLRLDTASWNILIAGYVK 452
           HS VLK GL SN FIQNSLIN+Y K G IK+A+L+FD+C  L+  S NI++ GY K
Sbjct: 292 HSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDACPTLNPISCNIMVCGYAK 347



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/80 (35%), Positives = 45/80 (56%)
 Frame = +3

Query: 213 SEFAIVSALKSCTSLLTIHQGEQIHSFVLKSGLDSNIFIQNSLINLYVKCGFIKEARLMF 392
           +E  +V+ + +C  L  I  G Q+H  V+K G D   FIQ ++I+ Y  CG +  A L F
Sbjct: 532 NEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYAACGMMDLACLQF 591

Query: 393 DSCLRLDTASWNILIAGYVK 452
           +   +    SWN L++G++K
Sbjct: 592 EVGAKDHLESWNALVSGFIK 611