BLASTX nr result

ID: Cimicifuga21_contig00037765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037765
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281382.2| PREDICTED: zinc finger Ran-binding domain-co...   186   1e-45
ref|XP_002514699.1| ATP binding protein, putative [Ricinus commu...   179   2e-43
ref|XP_002318593.1| hypothetical protein POPTRDRAFT_569944 [Popu...   177   6e-43
emb|CBI15155.3| unnamed protein product [Vitis vinifera]              173   1e-41
ref|XP_002873325.1| SNF2 domain-containing protein [Arabidopsis ...   172   3e-41

>ref|XP_002281382.2| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
           [Vitis vinifera]
          Length = 1280

 Score =  186 bits (473), Expect = 1e-45
 Identities = 90/112 (80%), Positives = 96/112 (85%)
 Frame = -2

Query: 336 DDVDALLMKLPKVLSDTLLPFQFDGVRFGLRRGGCCLIADEMGLGKTIQAIAIACCFMNE 157
           D VD L+  LPK L D LLPFQ DGVRFGLRRGG CLIADEMGLGKT+QAIAIA CFMNE
Sbjct: 188 DKVDELIGMLPKRLLDALLPFQLDGVRFGLRRGGRCLIADEMGLGKTLQAIAIASCFMNE 247

Query: 156 GSILVVCPAILRFSWAEELERWLPILSPTDIHLVFGHKDNPSSLTRCPKVVV 1
           G ILVVCPAILRFSWAEELERWLP   P DIHLVFGH++NP+ LTRCP+VVV
Sbjct: 248 GPILVVCPAILRFSWAEELERWLPFCLPADIHLVFGHQNNPAHLTRCPRVVV 299


>ref|XP_002514699.1| ATP binding protein, putative [Ricinus communis]
           gi|223546303|gb|EEF47805.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1229

 Score =  179 bits (455), Expect = 2e-43
 Identities = 85/112 (75%), Positives = 97/112 (86%)
 Frame = -2

Query: 336 DDVDALLMKLPKVLSDTLLPFQFDGVRFGLRRGGCCLIADEMGLGKTIQAIAIACCFMNE 157
           + VD L+  LP+ + D LLPFQ DG+RFGLRRGG CLIADEMGLGKT+QAIAIA CFMNE
Sbjct: 194 EKVDELIGNLPRKILDVLLPFQLDGLRFGLRRGGRCLIADEMGLGKTLQAIAIAGCFMNE 253

Query: 156 GSILVVCPAILRFSWAEELERWLPILSPTDIHLVFGHKDNPSSLTRCPKVVV 1
           G ILVVCPAILRFSWAEELERWLP   P++IHLVFGH++NP+ LTRCP+VVV
Sbjct: 254 GPILVVCPAILRFSWAEELERWLPSCLPSEIHLVFGHQNNPAYLTRCPRVVV 305


>ref|XP_002318593.1| hypothetical protein POPTRDRAFT_569944 [Populus trichocarpa]
           gi|222859266|gb|EEE96813.1| hypothetical protein
           POPTRDRAFT_569944 [Populus trichocarpa]
          Length = 420

 Score =  177 bits (450), Expect = 6e-43
 Identities = 84/112 (75%), Positives = 94/112 (83%)
 Frame = -2

Query: 336 DDVDALLMKLPKVLSDTLLPFQFDGVRFGLRRGGCCLIADEMGLGKTIQAIAIACCFMNE 157
           + VD  +  LP+ L D LLPFQ DG+RFGLRRGG CLIADEMGLGKT+QAIAIA CF+NE
Sbjct: 193 EKVDEFIRMLPRKLLDVLLPFQHDGLRFGLRRGGRCLIADEMGLGKTLQAIAIAGCFINE 252

Query: 156 GSILVVCPAILRFSWAEELERWLPILSPTDIHLVFGHKDNPSSLTRCPKVVV 1
           G ILVVCPAILRFSWAEELERW+P   P++IHLVFGH+ NP  LTRCPKVVV
Sbjct: 253 GPILVVCPAILRFSWAEELERWMPFCLPSEIHLVFGHRTNPMHLTRCPKVVV 304


>emb|CBI15155.3| unnamed protein product [Vitis vinifera]
          Length = 1201

 Score =  173 bits (439), Expect = 1e-41
 Identities = 84/113 (74%), Positives = 92/113 (81%), Gaps = 1/113 (0%)
 Frame = -2

Query: 336 DDVDALLMKLPKVLSDTLLPFQFDGVRFGLRRGGCCLIADEMGLGKTIQA-IAIACCFMN 160
           D VD L+  LPK L D LLPFQ DGVRFGLRRGG CLIADEMGLGKT+Q  +   CC +N
Sbjct: 188 DKVDELIGMLPKRLLDALLPFQLDGVRFGLRRGGRCLIADEMGLGKTLQVRVTTECCDIN 247

Query: 159 EGSILVVCPAILRFSWAEELERWLPILSPTDIHLVFGHKDNPSSLTRCPKVVV 1
           EG ILVVCPAILRFSWAEELERWLP   P DIHLVFGH++NP+ LTRCP+VVV
Sbjct: 248 EGPILVVCPAILRFSWAEELERWLPFCLPADIHLVFGHQNNPAHLTRCPRVVV 300


>ref|XP_002873325.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319162|gb|EFH49584.1| SNF2 domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1194

 Score =  172 bits (435), Expect = 3e-41
 Identities = 82/112 (73%), Positives = 94/112 (83%)
 Frame = -2

Query: 336 DDVDALLMKLPKVLSDTLLPFQFDGVRFGLRRGGCCLIADEMGLGKTIQAIAIACCFMNE 157
           + V+ L+  LP+ L   LLPFQ DG+RFGLRRGG C IADEMGLGKT+QAIAIA CF++E
Sbjct: 187 EKVEKLIETLPRKLVSALLPFQLDGLRFGLRRGGRCFIADEMGLGKTLQAIAIAGCFISE 246

Query: 156 GSILVVCPAILRFSWAEELERWLPILSPTDIHLVFGHKDNPSSLTRCPKVVV 1
           GSILVVCPA+LRFSWAEELERWLP   P+DIHLVFGH+DNP+ L R PKVVV
Sbjct: 247 GSILVVCPAVLRFSWAEELERWLPFCLPSDIHLVFGHQDNPAYLPRWPKVVV 298


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