BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037746
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chlor...    77   1e-12
emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera]    77   2e-12
ref|XP_002301949.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12
ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...    73   3e-11
ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chlor...    73   3e-11

>ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Vitis
           vinifera] gi|302141717|emb|CBI18920.3| unnamed protein
           product [Vitis vinifera]
          Length = 433

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 44/91 (48%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
 Frame = -2

Query: 265 LLPQKPRKSTRVFRIFNSFSSSMSTGESVSNQSRETLNGESGNYAGVQLQEIV---EKTS 95
           L P+ P+  +RVFRI  + S+S       +++   +++G   NYAGV+L+E V      S
Sbjct: 22  LFPRNPKSCSRVFRILRACSNS-------TDEPLVSVSGRRTNYAGVRLEETVVDVNSDS 74

Query: 94  SKSRIDAWISSRIGGVSRARVQSSIRAGLVS 2
            K R+D+WISSRI G+SRARVQSSIR+GLVS
Sbjct: 75  GKLRLDSWISSRIIGISRARVQSSIRSGLVS 105


>emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera]
          Length = 611

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 48/93 (51%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
 Frame = -2

Query: 271 IYLLPQKPRKSTRVFRIFNSFSSSMSTGESVSNQSRETLNGESGNYAGVQLQEIV---EK 101
           + L P+ P+  +RVFRI    S+S      VS  SR T      NYAGV+L+E V     
Sbjct: 149 VLLFPRNPKSCSRVFRILRDCSNSTDE-PLVSVSSRRT------NYAGVRLEETVVDVNS 201

Query: 100 TSSKSRIDAWISSRIGGVSRARVQSSIRAGLVS 2
            S K R+D+WISSRI G+SRARVQSSIR+GLVS
Sbjct: 202 DSGKLRLDSWISSRIIGISRARVQSSIRSGLVS 234


>ref|XP_002301949.1| predicted protein [Populus trichocarpa] gi|222843675|gb|EEE81222.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 47/89 (52%), Positives = 60/89 (67%)
 Frame = -2

Query: 268 YLLPQKPRKSTRVFRIFNSFSSSMSTGESVSNQSRETLNGESGNYAGVQLQEIVEKTSSK 89
           + L QKP  S    R+    SSS  T E  SNQ+     G+  NY+GV+L+E V+  S K
Sbjct: 44  FFLSQKPTAS----RLLTVHSSS--TREPNSNQNP----GQRINYSGVKLEESVDSKSGK 93

Query: 88  SRIDAWISSRIGGVSRARVQSSIRAGLVS 2
           SR+D+WISSRI G+SRARVQSSI++GLVS
Sbjct: 94  SRLDSWISSRISGISRARVQSSIKSGLVS 122


>ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 2,
           chloroplastic-like [Cucumis sativus]
          Length = 452

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 41/86 (47%), Positives = 55/86 (63%)
 Frame = -2

Query: 259 PQKPRKSTRVFRIFNSFSSSMSTGESVSNQSRETLNGESGNYAGVQLQEIVEKTSSKSRI 80
           P + R  + V RI ++FS+  S   S  ++  E  +    NYAG +L+E V+    K R+
Sbjct: 23  PNRRRIGSNVLRISSNFSTRCS---SDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRL 79

Query: 79  DAWISSRIGGVSRARVQSSIRAGLVS 2
           D+WIS RI G+SRARVQSSIRAGLVS
Sbjct: 80  DSWISCRINGISRARVQSSIRAGLVS 105


>ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cucumis
           sativus]
          Length = 453

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 41/86 (47%), Positives = 55/86 (63%)
 Frame = -2

Query: 259 PQKPRKSTRVFRIFNSFSSSMSTGESVSNQSRETLNGESGNYAGVQLQEIVEKTSSKSRI 80
           P + R  + V RI ++FS+  S   S  ++  E  +    NYAG +L+E V+    K R+
Sbjct: 23  PNRRRIGSNVLRISSNFSTRCS---SDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRL 79

Query: 79  DAWISSRIGGVSRARVQSSIRAGLVS 2
           D+WIS RI G+SRARVQSSIRAGLVS
Sbjct: 80  DSWISCRINGISRARVQSSIRAGLVS 105