BLASTX nr result

ID: Cimicifuga21_contig00037730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037730
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304372.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002894531.1| F20N2.18 [Arabidopsis lyrata subsp. lyrata] ...    66   3e-09
ref|XP_003617633.1| hypothetical protein MTR_5g093740 [Medicago ...    65   6e-09
gb|AAF79340.1|AC002304_33 F14J16.3 [Arabidopsis thaliana]              65   8e-09
gb|AAF79500.1|AC002328_8 F20N2.18 [Arabidopsis thaliana]               65   8e-09

>ref|XP_002304372.1| predicted protein [Populus trichocarpa] gi|222841804|gb|EEE79351.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/37 (86%), Positives = 33/37 (89%)
 Frame = -3

Query: 112 KWLKYYSSTHQILLVGDGDFSFSLSLANCFGSASNIV 2
           KWLK+YSS HQILLVGDGDFSFSLSLA  FGS SNIV
Sbjct: 18  KWLKHYSSNHQILLVGDGDFSFSLSLALSFGSGSNIV 54


>ref|XP_002894531.1| F20N2.18 [Arabidopsis lyrata subsp. lyrata]
           gi|297340373|gb|EFH70790.1| F20N2.18 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 515

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/35 (85%), Positives = 32/35 (91%)
 Frame = -3

Query: 109 WLKYYSSTHQILLVGDGDFSFSLSLANCFGSASNI 5
           WLK+YSS HQILLVG+GDFSFS SLA CFGSASNI
Sbjct: 136 WLKHYSSKHQILLVGEGDFSFSCSLATCFGSASNI 170


>ref|XP_003617633.1| hypothetical protein MTR_5g093740 [Medicago truncatula]
           gi|355518968|gb|AET00592.1| hypothetical protein
           MTR_5g093740 [Medicago truncatula]
          Length = 525

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 29/37 (78%), Positives = 35/37 (94%)
 Frame = -3

Query: 112 KWLKYYSSTHQILLVGDGDFSFSLSLANCFGSASNIV 2
           KW+K+YS+ H+ILLVG+GDFSF+LSLAN FGSASNIV
Sbjct: 4   KWIKHYSNHHKILLVGEGDFSFALSLANAFGSASNIV 40



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/37 (64%), Positives = 32/37 (86%)
 Frame = -3

Query: 112 KWLKYYSSTHQILLVGDGDFSFSLSLANCFGSASNIV 2
           +W+K+Y+S  +ILLVG+GDFSF+LSLA  F SASN+V
Sbjct: 253 RWIKHYNSCQKILLVGEGDFSFALSLARAFRSASNMV 289


>gb|AAF79340.1|AC002304_33 F14J16.3 [Arabidopsis thaliana]
          Length = 1033

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = -3

Query: 109 WLKYYSSTHQILLVGDGDFSFSLSLANCFGSASNI 5
           W+K+YSS HQILLVG+GDFSFS SLA CFGSASNI
Sbjct: 159 WVKHYSSKHQILLVGEGDFSFSCSLATCFGSASNI 193



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/35 (80%), Positives = 31/35 (88%)
 Frame = -3

Query: 109 WLKYYSSTHQILLVGDGDFSFSLSLANCFGSASNI 5
           W+K+YSS HQILLVG+GDFSFS SLA  FGSASNI
Sbjct: 542 WVKHYSSNHQILLVGEGDFSFSHSLATLFGSASNI 576


>gb|AAF79500.1|AC002328_8 F20N2.18 [Arabidopsis thaliana]
          Length = 512

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = -3

Query: 109 WLKYYSSTHQILLVGDGDFSFSLSLANCFGSASNI 5
           W+K+YSS HQILLVG+GDFSFS SLA CFGSASNI
Sbjct: 138 WVKHYSSKHQILLVGEGDFSFSCSLATCFGSASNI 172


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