BLASTX nr result

ID: Cimicifuga21_contig00037652 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037652
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155881.1| PREDICTED: protein PAIR1-like [Cucumis sativus]    57   2e-06
emb|CBI40382.3| unnamed protein product [Vitis vinifera]               55   6e-06
ref|XP_002274925.1| PREDICTED: protein PAIR1-like [Vitis vinifera]     55   6e-06

>ref|XP_004155881.1| PREDICTED: protein PAIR1-like [Cucumis sativus]
          Length = 411

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/76 (46%), Positives = 39/76 (51%)
 Frame = +2

Query: 179 MKLKINKACDLSSISVLPPQSRRGNVIGSGADTSVFGKXXXXXXXXXXXXXXXXXXXXXX 358
           M+LKINKACDLSSISVLPPQSRR N + +G   S                          
Sbjct: 1   MRLKINKACDLSSISVLPPQSRRLNALTTGQQASQL--RSQPSQQSFSQGLSSQHGMYSQ 58

Query: 359 XXXNSIDEYLTNEQRF 406
              NS DE +TNEQRF
Sbjct: 59  LSQNSFDEVVTNEQRF 74


>emb|CBI40382.3| unnamed protein product [Vitis vinifera]
          Length = 354

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/77 (40%), Positives = 40/77 (51%)
 Frame = +2

Query: 179 MKLKINKACDLSSISVLPPQSRRGNVIGSGADTSVFGKXXXXXXXXXXXXXXXXXXXXXX 358
           MK+KINKACDLSSISVLPP +RR + + +G   S   +                      
Sbjct: 1   MKMKINKACDLSSISVLPPHTRRSSTVPTGPQVS---QQLRSQQQSQQSFSQSQHGMFSQ 57

Query: 359 XXXNSIDEYLTNEQRFG 409
              NS+DE + N+QRFG
Sbjct: 58  FSQNSLDEIVANDQRFG 74


>ref|XP_002274925.1| PREDICTED: protein PAIR1-like [Vitis vinifera]
          Length = 378

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/77 (40%), Positives = 40/77 (51%)
 Frame = +2

Query: 179 MKLKINKACDLSSISVLPPQSRRGNVIGSGADTSVFGKXXXXXXXXXXXXXXXXXXXXXX 358
           MK+KINKACDLSSISVLPP +RR + + +G   S   +                      
Sbjct: 1   MKMKINKACDLSSISVLPPHTRRSSTVPTGPQVS---QQLRSQQQSQQSFSQSQHGMFSQ 57

Query: 359 XXXNSIDEYLTNEQRFG 409
              NS+DE + N+QRFG
Sbjct: 58  FSQNSLDEIVANDQRFG 74


Top