BLASTX nr result

ID: Cimicifuga21_contig00037648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037648
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002525835.1| conserved hypothetical protein [Ricinus comm...    61   8e-08
ref|XP_003621771.1| F-box family protein [Medicago truncatula] g...    60   2e-07
gb|AFK44336.1| unknown [Lotus japonicus]                               60   2e-07
ref|XP_003571902.1| PREDICTED: uncharacterized protein LOC100836...    60   2e-07

>ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|222852550|gb|EEE90097.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/84 (40%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
 Frame = -3

Query: 242 PPLYQTSMKRGRLVGE---DLPHDILLDIFSRLPAKSIGRFRCISKSWHTQLTNPVFINT 72
           PP  QT+ KR +       +LPH+++++I SRLPAKS+ +FRC+SKS+ + ++NP FI T
Sbjct: 61  PP--QTNKKRTKKTPPPLPNLPHELIIEILSRLPAKSLIKFRCVSKSFKSLISNPQFIKT 118

Query: 71  HL-NLSELNNNYDDHNHRKMVFKS 3
           HL  +  L+ N  D +   ++  S
Sbjct: 119 HLEKVKNLSRNDPDFSPEIVISSS 142


>ref|XP_002525835.1| conserved hypothetical protein [Ricinus communis]
           gi|223534840|gb|EEF36529.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 371

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 26/52 (50%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
 Frame = -3

Query: 197 EDLPHDILLDIFSRLPAKSIGRFRCISKSWHTQLTNPVFINTHLNLS-ELNN 45
           E++P +IL++I  RLP KS+ ++RC+ +SWH+ +TN  FI+TH+N S E NN
Sbjct: 3   ENIPQEILIEILKRLPVKSLLKYRCVCQSWHSLITNSSFISTHINHSIECNN 54


>ref|XP_003621771.1| F-box family protein [Medicago truncatula]
           gi|355496786|gb|AES77989.1| F-box family protein
           [Medicago truncatula]
          Length = 524

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
 Frame = -3

Query: 251 SEVPPLYQTSMKRGRLVGEDLPHDILLDIFSRLPAKSIGRFRCISKSWHTQLTNPVFINT 72
           +++P L +   +      E LP +++ +I SRLP +S+ + +C+ KSW+T +++P FI  
Sbjct: 74  TQLPNLRRLRSQSNLPPSETLPDEVMAEILSRLPVRSLMQIKCVCKSWNTIISDPKFIKM 133

Query: 71  HLNLSELNNN----------YDDHNHRKMVF 9
           HLN S  N N          +DD +HR + F
Sbjct: 134 HLNRSARNPNFSVVSYETPSFDDDDHRFVPF 164


>gb|AFK44336.1| unknown [Lotus japonicus]
          Length = 193

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/69 (37%), Positives = 44/69 (63%)
 Frame = -3

Query: 236 LYQTSMKRGRLVGEDLPHDILLDIFSRLPAKSIGRFRCISKSWHTQLTNPVFINTHLNLS 57
           L Q+   +   V   LP +++++I SRLP KS+ +FRC+ KSW   +++P FI  HL+LS
Sbjct: 48  LKQSQQNQAMAVATFLPDELVVEILSRLPVKSLLKFRCVCKSWMLLISDPYFIKKHLHLS 107

Query: 56  ELNNNYDDH 30
           + +  ++ H
Sbjct: 108 KQSTLFNHH 116


>ref|XP_003571902.1| PREDICTED: uncharacterized protein LOC100836041 [Brachypodium
           distachyon]
          Length = 695

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 25/50 (50%), Positives = 37/50 (74%)
 Frame = -3

Query: 191 LPHDILLDIFSRLPAKSIGRFRCISKSWHTQLTNPVFINTHLNLSELNNN 42
           LP DI+  I + LPAKS+G+FR +S+SW+ +L++P FI+ HL  +  NNN
Sbjct: 15  LPDDIITKILAYLPAKSVGQFRTVSRSWNAELSSPSFIDLHLRCANRNNN 64


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