BLASTX nr result
ID: Cimicifuga21_contig00037648
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00037648 (259 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|2... 62 6e-08 ref|XP_002525835.1| conserved hypothetical protein [Ricinus comm... 61 8e-08 ref|XP_003621771.1| F-box family protein [Medicago truncatula] g... 60 2e-07 gb|AFK44336.1| unknown [Lotus japonicus] 60 2e-07 ref|XP_003571902.1| PREDICTED: uncharacterized protein LOC100836... 60 2e-07 >ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|222852550|gb|EEE90097.1| predicted protein [Populus trichocarpa] Length = 445 Score = 61.6 bits (148), Expect = 6e-08 Identities = 34/84 (40%), Positives = 54/84 (64%), Gaps = 4/84 (4%) Frame = -3 Query: 242 PPLYQTSMKRGRLVGE---DLPHDILLDIFSRLPAKSIGRFRCISKSWHTQLTNPVFINT 72 PP QT+ KR + +LPH+++++I SRLPAKS+ +FRC+SKS+ + ++NP FI T Sbjct: 61 PP--QTNKKRTKKTPPPLPNLPHELIIEILSRLPAKSLIKFRCVSKSFKSLISNPQFIKT 118 Query: 71 HL-NLSELNNNYDDHNHRKMVFKS 3 HL + L+ N D + ++ S Sbjct: 119 HLEKVKNLSRNDPDFSPEIVISSS 142 >ref|XP_002525835.1| conserved hypothetical protein [Ricinus communis] gi|223534840|gb|EEF36529.1| conserved hypothetical protein [Ricinus communis] Length = 371 Score = 61.2 bits (147), Expect = 8e-08 Identities = 26/52 (50%), Positives = 40/52 (76%), Gaps = 1/52 (1%) Frame = -3 Query: 197 EDLPHDILLDIFSRLPAKSIGRFRCISKSWHTQLTNPVFINTHLNLS-ELNN 45 E++P +IL++I RLP KS+ ++RC+ +SWH+ +TN FI+TH+N S E NN Sbjct: 3 ENIPQEILIEILKRLPVKSLLKYRCVCQSWHSLITNSSFISTHINHSIECNN 54 >ref|XP_003621771.1| F-box family protein [Medicago truncatula] gi|355496786|gb|AES77989.1| F-box family protein [Medicago truncatula] Length = 524 Score = 60.1 bits (144), Expect = 2e-07 Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 10/91 (10%) Frame = -3 Query: 251 SEVPPLYQTSMKRGRLVGEDLPHDILLDIFSRLPAKSIGRFRCISKSWHTQLTNPVFINT 72 +++P L + + E LP +++ +I SRLP +S+ + +C+ KSW+T +++P FI Sbjct: 74 TQLPNLRRLRSQSNLPPSETLPDEVMAEILSRLPVRSLMQIKCVCKSWNTIISDPKFIKM 133 Query: 71 HLNLSELNNN----------YDDHNHRKMVF 9 HLN S N N +DD +HR + F Sbjct: 134 HLNRSARNPNFSVVSYETPSFDDDDHRFVPF 164 >gb|AFK44336.1| unknown [Lotus japonicus] Length = 193 Score = 59.7 bits (143), Expect = 2e-07 Identities = 26/69 (37%), Positives = 44/69 (63%) Frame = -3 Query: 236 LYQTSMKRGRLVGEDLPHDILLDIFSRLPAKSIGRFRCISKSWHTQLTNPVFINTHLNLS 57 L Q+ + V LP +++++I SRLP KS+ +FRC+ KSW +++P FI HL+LS Sbjct: 48 LKQSQQNQAMAVATFLPDELVVEILSRLPVKSLLKFRCVCKSWMLLISDPYFIKKHLHLS 107 Query: 56 ELNNNYDDH 30 + + ++ H Sbjct: 108 KQSTLFNHH 116 >ref|XP_003571902.1| PREDICTED: uncharacterized protein LOC100836041 [Brachypodium distachyon] Length = 695 Score = 59.7 bits (143), Expect = 2e-07 Identities = 25/50 (50%), Positives = 37/50 (74%) Frame = -3 Query: 191 LPHDILLDIFSRLPAKSIGRFRCISKSWHTQLTNPVFINTHLNLSELNNN 42 LP DI+ I + LPAKS+G+FR +S+SW+ +L++P FI+ HL + NNN Sbjct: 15 LPDDIITKILAYLPAKSVGQFRTVSRSWNAELSSPSFIDLHLRCANRNNN 64