BLASTX nr result

ID: Cimicifuga21_contig00037625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037625
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arac...    80   1e-13
gb|ADI61822.1| endonuclease-reverse transcriptase [Bombyx mori]        75   4e-12
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...    74   9e-12
emb|CCH50976.1| T4.15 [Malus x robusta]                                74   2e-11
emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [He...    72   4e-11

>gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 1939

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 39/100 (39%), Positives = 61/100 (61%)
 Frame = -3

Query: 301  QQIIQHNIKTFKACQLSK*QHDLEEYRKSKNEAKKIVSITKTNALNALYDKLGTKDGKNA 122
            Q+ I+   + FK   L +   + E+Y+ +K E K  VS  +T A   LY  L TK+G+  
Sbjct: 825  QEKIKIKRECFKEWSLCRNVDNWEKYKAAKKETKVAVSEARTRAYEGLYQSLDTKEGEKG 884

Query: 121  IYKLAKNRDKSTEDMEQIKCIKDINNTISVKEEDILARWK 2
            IY++AK+R++ T D++Q+KCIKD +  +  +EE I  RWK
Sbjct: 885  IYRIAKSRERRTRDLDQVKCIKDKDREVLAQEEKINERWK 924


>gb|ADI61822.1| endonuclease-reverse transcriptase [Bombyx mori]
          Length = 996

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 37/99 (37%), Positives = 57/99 (57%)
 Frame = -3

Query: 301 QQIIQHNIKTFKACQLSK*QHDLEEYRKSKNEAKKIVSITKTNALNALYDKLGTKDGKNA 122
           Q  IQ     FK  Q ++   D E Y++ K E KKIV++ +  AL  +Y++L TK+G+  
Sbjct: 377 QNAIQKKKDAFKTWQSTQTSEDQERYKRIKKETKKIVAVERAVALKTMYEQLETKEGQKC 436

Query: 121 IYKLAKNRDKSTEDMEQIKCIKDINNTISVKEEDILARW 5
           I+KLAK R  ST D  + + +KD N  +   + D+L+ W
Sbjct: 437 IFKLAKQRCWSTRDPTRCRAVKDPNGELLYGDSDVLSAW 475


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 517

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 31/68 (45%), Positives = 49/68 (72%)
 Frame = -3

Query: 232 EEYRKSKNEAKKIVSITKTNALNALYDKLGTKDGKNAIYKLAKNRDKSTEDMEQIKCIKD 53
           ++Y+ ++ EAKK+VS  +T A   LY  LGTK+G+ +IYKL+K R++ T D++Q+KCIKD
Sbjct: 61  DKYKIARKEAKKVVSEARTQAFEGLYQSLGTKEGEKSIYKLSKGRERKTRDLDQVKCIKD 120

Query: 52  INNTISVK 29
               + V+
Sbjct: 121 EEGRVLVR 128


>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
 Frame = -3

Query: 292 IQHNIKTFKAC--QLSK*QHDL--EEYRKSKNEAKKIVSITKTNALNALYDKLGTKDGKN 125
           +Q  +K  K C   L K + D   E YRK+K EAKK V   K  A + +Y +L TK+G+ 
Sbjct: 425 VQTKVKAKKECCKALYKDRTDENGERYRKAKQEAKKAVREAKLAAYDDMYKRLDTKEGEL 484

Query: 124 AIYKLAKNRDKSTEDMEQIKCIKDINNTISVKEEDILARWK 2
            IYKLA+ R+K T D+ Q++CIKD +  +   E  +  RW+
Sbjct: 485 DIYKLARAREKKTRDLNQVRCIKDEDGKVLATENAVKDRWR 525


>emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene]
          Length = 990

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/100 (34%), Positives = 58/100 (58%)
 Frame = -3

Query: 301 QQIIQHNIKTFKACQLSK*QHDLEEYRKSKNEAKKIVSITKTNALNALYDKLGTKDGKNA 122
           Q++ +     FK  Q S    D  EY  +K  +K+ V+  ++ +L+ LYDKL T +G+  
Sbjct: 375 QEVTREKKAAFKKWQESNSPEDRLEYTVAKRASKRAVARARSESLSPLYDKLETVEGQKL 434

Query: 121 IYKLAKNRDKSTEDMEQIKCIKDINNTISVKEEDILARWK 2
           IYKLA++RDK T+D+ +  C++D   T+    + +  RW+
Sbjct: 435 IYKLARSRDKVTQDIAKCLCVRDSQGTLLCNHDSVKERWR 474


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