BLASTX nr result

ID: Cimicifuga21_contig00037592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037592
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332640.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15
ref|XP_002512378.1| Kinesin-3, putative [Ricinus communis] gi|22...    85   7e-15
emb|CBI36770.3| unnamed protein product [Vitis vinifera]               62   4e-08
emb|CAN60539.1| hypothetical protein VITISV_018287 [Vitis vinifera]    57   2e-06
ref|XP_002280804.2| PREDICTED: kinesin-related protein 2-like [V...    56   3e-06

>ref|XP_002332640.1| predicted protein [Populus trichocarpa] gi|222832867|gb|EEE71344.1|
           predicted protein [Populus trichocarpa]
          Length = 338

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 54/105 (51%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
 Frame = -2

Query: 327 RQRASIATLCPDAQLLSEMNSHKT--STIRTKNGEMMARRLFVNDPR--RKSRIFSPLPE 160
           ++R SIAT        SE  S+ T   T R KNG ++ R+ FV DPR  R S++FSPLPE
Sbjct: 87  KRRVSIATY------RSEPTSNMTPLQTSRYKNGNVVGRQSFVRDPRKPRNSKLFSPLPE 140

Query: 159 LTTSGSGVETVGR--SKFLGSPPGGHQQVGSWKPKHPTTVALQRR 31
             T+     TV R  SKF+GSPP    Q GSWKPKHPT VALQR+
Sbjct: 141 FRTASETTPTVMRTSSKFMGSPP---PQAGSWKPKHPTVVALQRK 182


>ref|XP_002512378.1| Kinesin-3, putative [Ricinus communis] gi|223548339|gb|EEF49830.1|
           Kinesin-3, putative [Ricinus communis]
          Length = 786

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 53/108 (49%), Positives = 65/108 (60%), Gaps = 9/108 (8%)
 Frame = -2

Query: 327 RQRASIATLCPDAQLLSEMNSHKTSTIRT-----KNGEMMARRLFVNDPR--RKSRIFSP 169
           R+R SIATL P      E+NS  T+ +RT     KN   M R+ F+ DPR  R SR+FSP
Sbjct: 657 RRRVSIATLRP------ELNSDLTTPLRTSGSQLKNSGAMGRQSFMKDPRKARYSRLFSP 710

Query: 168 LPELTTSGSGVETVGRS--KFLGSPPGGHQQVGSWKPKHPTTVALQRR 31
           LPE  ++     T  RS  KF+GSPP    Q G WKP+HPT VALQR+
Sbjct: 711 LPEFQSASETTPTAIRSSSKFMGSPPAA--QAGPWKPRHPTVVALQRK 756


>emb|CBI36770.3| unnamed protein product [Vitis vinifera]
          Length = 1347

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 45/106 (42%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
 Frame = -2

Query: 327 RQRASIATLCPDAQLLSEMNSHKTSTIRT--KNGEMMARRLFVNDP---RRKSRIFSPLP 163
           ++R SIAT  P      E NSH T+ + T  K+   + R+ FV DP   RR SRIFSPL 
Sbjct: 625 KRRVSIATFRP------ESNSHMTTPLNTQLKSRGAVGRQSFVRDPHRIRRISRIFSPLR 678

Query: 162 ELTTSGSGVETVGRS--KFLGSPPGGHQQVGSWKPKHPTTVALQRR 31
              +  +   T  RS  KF+GSPP    + GS + KHP  +ALQR+
Sbjct: 679 R-ASGATATPTAMRSSSKFMGSPP---MEAGSLRSKHPAVIALQRK 720


>emb|CAN60539.1| hypothetical protein VITISV_018287 [Vitis vinifera]
          Length = 726

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 46/128 (35%), Positives = 60/128 (46%), Gaps = 29/128 (22%)
 Frame = -2

Query: 327 RQRASIATLCPDAQLLSEMNSHKTSTIRTK---NGEMMARRLFVNDP---RRKSRIFSPL 166
           ++R SIAT  P      E NSH T+ + T+    G  + R+ FV DP   RR SRIFSPL
Sbjct: 587 KRRVSIATFRP------ESNSHMTTPLNTQLKSRGGAVGRQSFVRDPHRIRRISRIFSPL 640

Query: 165 PELTTSGSGVETV-----------------------GRSKFLGSPPGGHQQVGSWKPKHP 55
                SG+ V+                           SKF+GSPP    + GS + KHP
Sbjct: 641 RR--ASGATVQATPTAMRSSSRFMGPSMQATPTAMRSSSKFMGSPP---MEAGSLRSKHP 695

Query: 54  TTVALQRR 31
             +ALQR+
Sbjct: 696 AVIALQRK 703


>ref|XP_002280804.2| PREDICTED: kinesin-related protein 2-like [Vitis vinifera]
          Length = 783

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 46/127 (36%), Positives = 60/127 (47%), Gaps = 28/127 (22%)
 Frame = -2

Query: 327 RQRASIATLCPDAQLLSEMNSHKTSTIRT--KNGEMMARRLFVNDP---RRKSRIFSPLP 163
           ++R SIAT  P      E NSH T+ + T  K+   + R+ FV DP   RR SRIFSPL 
Sbjct: 645 KRRVSIATFRP------ESNSHMTTPLNTQLKSRGAVGRQSFVRDPHRIRRISRIFSPLR 698

Query: 162 ELTTSGSGVETV-----------------------GRSKFLGSPPGGHQQVGSWKPKHPT 52
               SG+ V+                           SKF+GSPP    + GS + KHP 
Sbjct: 699 R--ASGATVQATPTAMRSSSRFMGPSMQATPTAMRSSSKFMGSPP---MEAGSLRSKHPA 753

Query: 51  TVALQRR 31
            +ALQR+
Sbjct: 754 VIALQRK 760


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