BLASTX nr result

ID: Cimicifuga21_contig00037534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037534
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317519.1| nbs-lrr resistance protein [Populus trichoca...    78   6e-13
ref|XP_002325713.1| nbs-lrr resistance protein [Populus trichoca...    77   1e-12
ref|XP_002333460.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002332782.1| BED finger-nbs-lrr resistance protein [Popul...    76   2e-12
ref|XP_002333268.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12

>ref|XP_002317519.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222860584|gb|EEE98131.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 958

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 43/85 (50%), Positives = 50/85 (58%)
 Frame = +3

Query: 24  SPNCPGVRTLLLNGNPSLRHITHGLFVQMQGLRILNLRSTGIQFLPESISTLINLHVLDL 203
           SP CP + TL LN N  L  I    F  +QGL++LNL ST I  LP S S L+NL  L L
Sbjct: 483 SPMCPKLSTLFLNSNIELEMIADSFFKHLQGLKVLNLSSTAIPKLPGSFSDLVNLTALYL 542

Query: 204 SCCEKLKRVHSLEKLHSLRVLRLTY 278
             CEKL+ + SL KL  LR L L Y
Sbjct: 543 RRCEKLRHIPSLAKLRELRKLDLRY 567


>ref|XP_002325713.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222862588|gb|EEF00095.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 929

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 40/84 (47%), Positives = 56/84 (66%)
 Frame = +3

Query: 24  SPNCPGVRTLLLNGNPSLRHITHGLFVQMQGLRILNLRSTGIQFLPESISTLINLHVLDL 203
           SP CP + TLLL GN  L+ I    F Q++GL++L+L  TGI  LP+S+S L++L  L L
Sbjct: 416 SPRCPSLSTLLLRGNSELQFIADSFFEQLRGLKVLDLSYTGITKLPDSVSELVSLTALLL 475

Query: 204 SCCEKLKRVHSLEKLHSLRVLRLT 275
             C+ L+ V SLEKL +L+ L L+
Sbjct: 476 IDCKMLRHVPSLEKLRALKRLDLS 499


>ref|XP_002333460.1| predicted protein [Populus trichocarpa] gi|222836928|gb|EEE75321.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 43/85 (50%), Positives = 56/85 (65%)
 Frame = +3

Query: 24  SPNCPGVRTLLLNGNPSLRHITHGLFVQMQGLRILNLRSTGIQFLPESISTLINLHVLDL 203
           SP CP + TLLL GNP L  I    F Q+ GL++L+L STGI  L +S+S L+NL  L +
Sbjct: 58  SPKCPNLSTLLLCGNP-LVLIADSFFEQLHGLKVLDLSSTGITKLSDSVSELVNLTALLI 116

Query: 204 SCCEKLKRVHSLEKLHSLRVLRLTY 278
           + C KL+ V SLEKL +L+ L L Y
Sbjct: 117 NKCMKLRHVPSLEKLRALKRLELHY 141


>ref|XP_002332782.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222833191|gb|EEE71668.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 1214

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 42/84 (50%), Positives = 53/84 (63%)
 Frame = +3

Query: 24  SPNCPGVRTLLLNGNPSLRHITHGLFVQMQGLRILNLRSTGIQFLPESISTLINLHVLDL 203
           SP CP + TLLL  N  LR I    F Q+ GL++LNL  TGIQ LP+S+S L++L  L L
Sbjct: 688 SPRCPYLSTLLLCQNRWLRFIADSFFKQLHGLKVLNLAGTGIQNLPDSVSDLVSLTALLL 747

Query: 204 SCCEKLKRVHSLEKLHSLRVLRLT 275
             CE L+ V S EKL  L+ L L+
Sbjct: 748 KGCENLRHVPSFEKLGELKRLDLS 771


>ref|XP_002333268.1| predicted protein [Populus trichocarpa] gi|222835869|gb|EEE74290.1|
           predicted protein [Populus trichocarpa]
          Length = 877

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 40/84 (47%), Positives = 55/84 (65%)
 Frame = +3

Query: 24  SPNCPGVRTLLLNGNPSLRHITHGLFVQMQGLRILNLRSTGIQFLPESISTLINLHVLDL 203
           SP CP + TLLL GN  L+ I    F Q++GL++L+L  TGI  LP+S+S L++L  L L
Sbjct: 369 SPRCPSLSTLLLRGNSELQFIADSFFEQLRGLKVLDLSYTGITKLPDSVSELVSLTALLL 428

Query: 204 SCCEKLKRVHSLEKLHSLRVLRLT 275
             C+ L+ V SLEKL  L+ L L+
Sbjct: 429 IGCKMLRHVPSLEKLRVLKRLDLS 452


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