BLASTX nr result
ID: Cimicifuga21_contig00037416
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00037416
(351 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI40106.3| unnamed protein product [Vitis vinifera] 154 6e-36
ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containi... 154 6e-36
emb|CAN80560.1| hypothetical protein VITISV_031385 [Vitis vinifera] 149 2e-34
ref|XP_002309013.1| predicted protein [Populus trichocarpa] gi|2... 143 1e-32
ref|XP_002520121.1| pentatricopeptide repeat-containing protein,... 140 1e-31
>emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 154 bits (390), Expect = 6e-36
Identities = 76/116 (65%), Positives = 93/116 (80%)
Frame = +1
Query: 1 VILTMYSKCNLTVDMEKAFRAIDENDVISWNTIISACSLSGDYAKGLQYFEEMMDKGIGV 180
VI+TMYS+ NL + EKAFR I+E DVISWNT+I+ACS D+AKGL+ F+ M ++ V
Sbjct: 242 VIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEE-TNV 300
Query: 181 RLDDFTFASALASCAGIASIHHGKQIHAHIVRTRWNLDVGVGNTLVNMYAKCGSIG 348
R DDFTF SALA+CAG+AS+ HGKQIHAH++RTR D+GVGN LVNMYAKCG IG
Sbjct: 301 RPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIG 356
Score = 63.2 bits (152), Expect = 2e-08
Identities = 29/111 (26%), Positives = 63/111 (56%)
Frame = +1
Query: 4 ILTMYSKCNLTVDMEKAFRAIDENDVISWNTIISACSLSGDYAKGLQYFEEMMDKGIGVR 183
+L MY+KC T + F + E +++SW+ +IS +G+ + + +M +
Sbjct: 44 VLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF-----LV 98
Query: 184 LDDFTFASALASCAGIASIHHGKQIHAHIVRTRWNLDVGVGNTLVNMYAKC 336
+++ FAS +++CA ++++ G++IH+ ++ + V N+L++MY KC
Sbjct: 99 PNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKC 149
Score = 56.6 bits (135), Expect = 2e-06
Identities = 29/114 (25%), Positives = 55/114 (48%)
Frame = +1
Query: 4 ILTMYSKCNLTVDMEKAFRAIDENDVISWNTIISACSLSGDYAKGLQYFEEMMDKGIGVR 183
+++MY KCN D F E + +S+N +I+ + +GL++F+ M +G+
Sbjct: 142 LISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGL--I 199
Query: 184 LDDFTFASALASCAGIASIHHGKQIHAHIVRTRWNLDVGVGNTLVNMYAKCGSI 345
D F F L C ++ G ++H V+ + +GN ++ MY++ I
Sbjct: 200 PDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLI 253
>ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 154 bits (390), Expect = 6e-36
Identities = 76/116 (65%), Positives = 93/116 (80%)
Frame = +1
Query: 1 VILTMYSKCNLTVDMEKAFRAIDENDVISWNTIISACSLSGDYAKGLQYFEEMMDKGIGV 180
VI+TMYS+ NL + EKAFR I+E DVISWNT+I+ACS D+AKGL+ F+ M ++ V
Sbjct: 242 VIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEE-TNV 300
Query: 181 RLDDFTFASALASCAGIASIHHGKQIHAHIVRTRWNLDVGVGNTLVNMYAKCGSIG 348
R DDFTF SALA+CAG+AS+ HGKQIHAH++RTR D+GVGN LVNMYAKCG IG
Sbjct: 301 RPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIG 356
Score = 63.2 bits (152), Expect = 2e-08
Identities = 29/111 (26%), Positives = 63/111 (56%)
Frame = +1
Query: 4 ILTMYSKCNLTVDMEKAFRAIDENDVISWNTIISACSLSGDYAKGLQYFEEMMDKGIGVR 183
+L MY+KC T + F + E +++SW+ +IS +G+ + + +M +
Sbjct: 44 VLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF-----LV 98
Query: 184 LDDFTFASALASCAGIASIHHGKQIHAHIVRTRWNLDVGVGNTLVNMYAKC 336
+++ FAS +++CA ++++ G++IH+ ++ + V N+L++MY KC
Sbjct: 99 PNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKC 149
Score = 56.6 bits (135), Expect = 2e-06
Identities = 29/114 (25%), Positives = 55/114 (48%)
Frame = +1
Query: 4 ILTMYSKCNLTVDMEKAFRAIDENDVISWNTIISACSLSGDYAKGLQYFEEMMDKGIGVR 183
+++MY KCN D F E + +S+N +I+ + +GL++F+ M +G+
Sbjct: 142 LISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGL--I 199
Query: 184 LDDFTFASALASCAGIASIHHGKQIHAHIVRTRWNLDVGVGNTLVNMYAKCGSI 345
D F F L C ++ G ++H V+ + +GN ++ MY++ I
Sbjct: 200 PDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLI 253
>emb|CAN80560.1| hypothetical protein VITISV_031385 [Vitis vinifera]
Length = 730
Score = 149 bits (377), Expect = 2e-34
Identities = 74/116 (63%), Positives = 91/116 (78%)
Frame = +1
Query: 1 VILTMYSKCNLTVDMEKAFRAIDENDVISWNTIISACSLSGDYAKGLQYFEEMMDKGIGV 180
VI+TMYS+ NL + EKAFR I+E DVISWNT+I+ACS D+AKGL+ F+ M ++ V
Sbjct: 249 VIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEE-TNV 307
Query: 181 RLDDFTFASALASCAGIASIHHGKQIHAHIVRTRWNLDVGVGNTLVNMYAKCGSIG 348
R DDFTF SALA+CAG+AS+ HGKQIHAH++RT D+GV N LVNMYAKCG IG
Sbjct: 308 RPDDFTFTSALAACAGLASMSHGKQIHAHLMRTSLYRDLGVDNALVNMYAKCGCIG 363
Score = 63.9 bits (154), Expect = 1e-08
Identities = 29/111 (26%), Positives = 63/111 (56%)
Frame = +1
Query: 4 ILTMYSKCNLTVDMEKAFRAIDENDVISWNTIISACSLSGDYAKGLQYFEEMMDKGIGVR 183
+L MY+KC T + F + E +++SW+ +IS +G+ + + +M +
Sbjct: 51 VLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF-----LV 105
Query: 184 LDDFTFASALASCAGIASIHHGKQIHAHIVRTRWNLDVGVGNTLVNMYAKC 336
+++ FAS +++CA ++++ G++IH+ ++ + V N+L++MY KC
Sbjct: 106 PNEYVFASVISACASLSALTQGQKIHSRSLKFGYESISFVSNSLISMYMKC 156
Score = 55.1 bits (131), Expect = 6e-06
Identities = 28/114 (24%), Positives = 54/114 (47%)
Frame = +1
Query: 4 ILTMYSKCNLTVDMEKAFRAIDENDVISWNTIISACSLSGDYAKGLQYFEEMMDKGIGVR 183
+++MY KCN D F E + +S+N +I+ + +G ++F+ M +G+
Sbjct: 149 LISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGFEFFKLMXQQGL--I 206
Query: 184 LDDFTFASALASCAGIASIHHGKQIHAHIVRTRWNLDVGVGNTLVNMYAKCGSI 345
D F F L C ++ G ++H V+ + +GN ++ MY++ I
Sbjct: 207 PDRFAFMGVLGICTTTENLKRGTELHCQTVKLNLDSTPFIGNVIITMYSELNLI 260
>ref|XP_002309013.1| predicted protein [Populus trichocarpa] gi|222854989|gb|EEE92536.1|
predicted protein [Populus trichocarpa]
Length = 583
Score = 143 bits (361), Expect = 1e-32
Identities = 69/115 (60%), Positives = 91/115 (79%)
Frame = +1
Query: 1 VILTMYSKCNLTVDMEKAFRAIDENDVISWNTIISACSLSGDYAKGLQYFEEMMDKGIGV 180
+I+TMYSK NL + EKAFR+I+E D+ISWNT IS+CS D+ K L+ F+EM+++ V
Sbjct: 242 LIITMYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNE-CRV 300
Query: 181 RLDDFTFASALASCAGIASIHHGKQIHAHIVRTRWNLDVGVGNTLVNMYAKCGSI 345
R D+FTFASALA+C+G+AS+ +GKQIH H++RTR DVG GN L+NMYAKCG I
Sbjct: 301 RPDEFTFASALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCI 355
Score = 63.5 bits (153), Expect = 2e-08
Identities = 31/112 (27%), Positives = 58/112 (51%)
Frame = +1
Query: 4 ILTMYSKCNLTVDMEKAFRAIDENDVISWNTIISACSLSGDYAKGLQYFEEMMDKGIGVR 183
IL +Y+KC + + F + E +++SW+ +IS G+ L F ++ +
Sbjct: 44 ILNLYAKCRKLREARQVFDEMSERNLVSWSAMISGYEQIGEPISALGLFSKL-----NIV 98
Query: 184 LDDFTFASALASCAGIASIHHGKQIHAHIVRTRWNLDVGVGNTLVNMYAKCG 339
+++ +AS +++CA + + GKQIH ++ + V N L+ MY KCG
Sbjct: 99 PNEYVYASVISACASLKGLVQGKQIHGQALKFGLDSVSFVSNALITMYMKCG 150
>ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540613|gb|EEF42176.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 589
Score = 140 bits (352), Expect = 1e-31
Identities = 68/115 (59%), Positives = 84/115 (73%)
Frame = +1
Query: 1 VILTMYSKCNLTVDMEKAFRAIDENDVISWNTIISACSLSGDYAKGLQYFEEMMDKGIGV 180
VI+TMYSK NL + EK F I E D+ISWNT+++AC D+ + L+ F +M+D V
Sbjct: 242 VIITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCF-V 300
Query: 181 RLDDFTFASALASCAGIASIHHGKQIHAHIVRTRWNLDVGVGNTLVNMYAKCGSI 345
+ DDFTFA LA+CAG+ASI HGKQIH H++RTR DVGV N LVNMYAKCGSI
Sbjct: 301 KPDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSI 355
Score = 65.5 bits (158), Expect = 4e-09
Identities = 31/112 (27%), Positives = 59/112 (52%)
Frame = +1
Query: 4 ILTMYSKCNLTVDMEKAFRAIDENDVISWNTIISACSLSGDYAKGLQYFEEMMDKGIGVR 183
++ +YSKC + + F + + +++SW+ IIS +G L F +M +
Sbjct: 44 VINLYSKCGNVIFARRMFDEMSDRNLVSWSAIISGYDQTGQPLLALNLFSQMR-----IV 98
Query: 184 LDDFTFASALASCAGIASIHHGKQIHAHIVRTRWNLDVGVGNTLVNMYAKCG 339
+++ FAS +++CA + ++ G Q+HA ++ V N L++MY KCG
Sbjct: 99 PNEYVFASVISACASLTALSQGLQVHAQSLKLGCVSVSFVSNALISMYMKCG 150
Score = 60.8 bits (146), Expect = 1e-07
Identities = 30/110 (27%), Positives = 52/110 (47%)
Frame = +1
Query: 4 ILTMYSKCNLTVDMEKAFRAIDENDVISWNTIISACSLSGDYAKGLQYFEEMMDKGIGVR 183
+++MY KC L D + E + +S+N +I+ + KG++ F+ M KG
Sbjct: 142 LISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEKGIEAFKVMRQKGFAP- 200
Query: 184 LDDFTFASALASCAGIASIHHGKQIHAHIVRTRWNLDVGVGNTLVNMYAK 333
D FTF+ L C G Q+H +++ +GN ++ MY+K
Sbjct: 201 -DRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITMYSK 249
Score = 55.5 bits (132), Expect = 5e-06
Identities = 27/83 (32%), Positives = 45/83 (54%)
Frame = +1
Query: 4 ILTMYSKCNLTVDMEKAFRAIDENDVISWNTIISACSLSGDYAKGLQYFEEMMDKGIGVR 183
++ MY+KC + FR + +++SWNTII+A G A+ L++FE+M K +G+
Sbjct: 345 LVNMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKM--KTVGIH 402
Query: 184 LDDFTFASALASCAGIASIHHGK 252
D TF L +C + G+
Sbjct: 403 PDSVTFVGLLTACNHAGLVEEGQ 425