BLASTX nr result

ID: Cimicifuga21_contig00037380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037380
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26064.3| unnamed protein product [Vitis vinifera]               63   2e-08
ref|XP_002275999.1| PREDICTED: uncharacterized protein LOC100245...    63   2e-08
ref|XP_002330339.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
emb|CBI39482.3| unnamed protein product [Vitis vinifera]               60   1e-07
emb|CAN77379.1| hypothetical protein VITISV_043864 [Vitis vinifera]    60   1e-07

>emb|CBI26064.3| unnamed protein product [Vitis vinifera]
          Length = 847

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/61 (52%), Positives = 41/61 (67%)
 Frame = -2

Query: 215 DYQSTNDSSFPSELSNSSHVATAEQQPAMTARRHSTRNRPLTTKAMEALACGLLTNKRKW 36
           D Q++  +  P+ L  S  VA +EQ P M +RR STRNRPLTTKA+EALA G L  +R+ 
Sbjct: 690 DDQASKQADDPNALKTSIGVANSEQPPNMNSRRQSTRNRPLTTKALEALASGFLNTRRRR 749

Query: 35  R 33
           R
Sbjct: 750 R 750


>ref|XP_002275999.1| PREDICTED: uncharacterized protein LOC100245979 [Vitis vinifera]
          Length = 894

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/61 (52%), Positives = 41/61 (67%)
 Frame = -2

Query: 215 DYQSTNDSSFPSELSNSSHVATAEQQPAMTARRHSTRNRPLTTKAMEALACGLLTNKRKW 36
           D Q++  +  P+ L  S  VA +EQ P M +RR STRNRPLTTKA+EALA G L  +R+ 
Sbjct: 764 DDQASKQADDPNALKTSIGVANSEQPPNMNSRRQSTRNRPLTTKALEALASGFLNTRRRR 823

Query: 35  R 33
           R
Sbjct: 824 R 824


>ref|XP_002330339.1| predicted protein [Populus trichocarpa] gi|222871543|gb|EEF08674.1|
           predicted protein [Populus trichocarpa]
          Length = 873

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/58 (53%), Positives = 41/58 (70%)
 Frame = -2

Query: 179 ELSNSSHVATAEQQPAMTARRHSTRNRPLTTKAMEALACGLLTNKRKWRGIVPMSREN 6
           ++S S+  +T +Q P M  RRHSTRNRPLTTKA+EALACG L+ K+K +     S +N
Sbjct: 768 KISTSACDSTPQQSPNMNLRRHSTRNRPLTTKALEALACGFLSIKQKRKSRDVFSLDN 825


>emb|CBI39482.3| unnamed protein product [Vitis vinifera]
          Length = 755

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/57 (52%), Positives = 38/57 (66%)
 Frame = -2

Query: 176 LSNSSHVATAEQQPAMTARRHSTRNRPLTTKAMEALACGLLTNKRKWRGIVPMSREN 6
           L  S +  +AE+QP M  +R STRNRPLTTKA+EALA G L  +RK +G    + EN
Sbjct: 647 LRTSVNAGSAEEQPIMKPQRQSTRNRPLTTKALEALASGFLNTRRKRKGTEVQAEEN 703


>emb|CAN77379.1| hypothetical protein VITISV_043864 [Vitis vinifera]
          Length = 958

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/57 (52%), Positives = 38/57 (66%)
 Frame = -2

Query: 176  LSNSSHVATAEQQPAMTARRHSTRNRPLTTKAMEALACGLLTNKRKWRGIVPMSREN 6
            L  S +  +AE+QP M  +R STRNRPLTTKA+EALA G L  +RK +G    + EN
Sbjct: 850  LRTSVNAGSAEEQPIMKPQRQSTRNRPLTTKALEALASGFLNTRRKRKGTEVQAEEN 906


Top