BLASTX nr result

ID: Cimicifuga21_contig00037337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037337
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278370.2| PREDICTED: protein KIAA0664 homolog [Vitis v...   220   1e-55
emb|CBI40528.3| unnamed protein product [Vitis vinifera]              220   1e-55
ref|XP_003548395.1| PREDICTED: protein TIF31 homolog [Glycine max]    212   3e-53
ref|XP_002523351.1| eukaryotic translation initiation factor 3 s...   211   6e-53
ref|XP_003528792.1| PREDICTED: uncharacterized protein LOC100808...   204   1e-50

>ref|XP_002278370.2| PREDICTED: protein KIAA0664 homolog [Vitis vinifera]
          Length = 1863

 Score =  220 bits (561), Expect = 1e-55
 Identities = 118/179 (65%), Positives = 141/179 (78%), Gaps = 1/179 (0%)
 Frame = -3

Query: 590 LFVDVAIFRAISSIWHVMETPCSTSSVGNTSILFSEEVGDLRISVRKDSSNASCKVDTKI 411
           LFVDVAIFRAIS++ HVM     T S  N+ IL+SE VGDL I V KD++NASCKVDTKI
Sbjct: 363 LFVDVAIFRAISAVQHVMGKLDLTHSSVNSEILYSERVGDLTIIVMKDATNASCKVDTKI 422

Query: 410 DGIQTTGVDPKHLVERNLLKGITADENTAAHDITTLGIVNVRYCGYIAVVKVR-QESSNI 234
           DGIQ TGV  ++LVERNLLKGITADENTAAHD  TLG+VNVRYCGYIAVVK+  +ESS +
Sbjct: 423 DGIQATGVGQQNLVERNLLKGITADENTAAHDFATLGVVNVRYCGYIAVVKLEGKESSKM 482

Query: 233 GPPLKSKIEMIDQPDGGANALNINSLRLILHKRPPSEHNKTLPNSPKAEYEELDVTRRF 57
               +S IE++DQP+GGANALNINSLRL+LH+R  SE+NK + +S   E+EEL   + F
Sbjct: 483 DTHFQS-IELLDQPEGGANALNINSLRLLLHQRTASENNKLVQHSQTLEHEELSAAQAF 540


>emb|CBI40528.3| unnamed protein product [Vitis vinifera]
          Length = 1446

 Score =  220 bits (561), Expect = 1e-55
 Identities = 118/179 (65%), Positives = 141/179 (78%), Gaps = 1/179 (0%)
 Frame = -3

Query: 590 LFVDVAIFRAISSIWHVMETPCSTSSVGNTSILFSEEVGDLRISVRKDSSNASCKVDTKI 411
           LFVDVAIFRAIS++ HVM     T S  N+ IL+SE VGDL I V KD++NASCKVDTKI
Sbjct: 363 LFVDVAIFRAISAVQHVMGKLDLTHSSVNSEILYSERVGDLTIIVMKDATNASCKVDTKI 422

Query: 410 DGIQTTGVDPKHLVERNLLKGITADENTAAHDITTLGIVNVRYCGYIAVVKVR-QESSNI 234
           DGIQ TGV  ++LVERNLLKGITADENTAAHD  TLG+VNVRYCGYIAVVK+  +ESS +
Sbjct: 423 DGIQATGVGQQNLVERNLLKGITADENTAAHDFATLGVVNVRYCGYIAVVKLEGKESSKM 482

Query: 233 GPPLKSKIEMIDQPDGGANALNINSLRLILHKRPPSEHNKTLPNSPKAEYEELDVTRRF 57
               +S IE++DQP+GGANALNINSLRL+LH+R  SE+NK + +S   E+EEL   + F
Sbjct: 483 DTHFQS-IELLDQPEGGANALNINSLRLLLHQRTASENNKLVQHSQTLEHEELSAAQAF 540


>ref|XP_003548395.1| PREDICTED: protein TIF31 homolog [Glycine max]
          Length = 1846

 Score =  212 bits (540), Expect = 3e-53
 Identities = 108/179 (60%), Positives = 133/179 (74%), Gaps = 1/179 (0%)
 Frame = -3

Query: 590 LFVDVAIFRAISSIWHVMETPCSTSSVGNTSILFSEEVGDLRISVRKDSSNASCKVDTKI 411
           LFVDVAIFRAI +I HVME P  + SV   +I+++E VGDL I+V KD S ASCK+DTKI
Sbjct: 357 LFVDVAIFRAIKAIKHVMEEPNFSCSVVENNIIYTERVGDLNINVLKDGSVASCKIDTKI 416

Query: 410 DGIQTTGVDPKHLVERNLLKGITADENTAAHDITTLGIVNVRYCGYIAVVKVR-QESSNI 234
           DG++ TGV+ K L+ERNL+KGITADENTAAHDITTLG++NVRYCGY+ VVKV    + N+
Sbjct: 417 DGVEATGVNQKDLLERNLMKGITADENTAAHDITTLGVINVRYCGYVVVVKVEGGVNENV 476

Query: 233 GPPLKSKIEMIDQPDGGANALNINSLRLILHKRPPSEHNKTLPNSPKAEYEELDVTRRF 57
             P +  IE+ DQP+GGANALNINSLRL+LH     E+NK +      E EEL  +  F
Sbjct: 477 DSPSQQNIELFDQPEGGANALNINSLRLLLHNTTSPENNKPVSQIQTFESEELGASHAF 535


>ref|XP_002523351.1| eukaryotic translation initiation factor 3 subunit, putative
           [Ricinus communis] gi|223537439|gb|EEF39067.1|
           eukaryotic translation initiation factor 3 subunit,
           putative [Ricinus communis]
          Length = 1872

 Score =  211 bits (538), Expect = 6e-53
 Identities = 112/179 (62%), Positives = 139/179 (77%), Gaps = 1/179 (0%)
 Frame = -3

Query: 590 LFVDVAIFRAISSIWHVMETPCSTSSVGNTSILFSEEVGDLRISVRKDSSNASCKVDTKI 411
           LFVD+AIFRAI ++  V   P   S VG++ IL +E +GDL I+V KD+SNASCKVD+KI
Sbjct: 368 LFVDIAIFRAIKAVQQVRVNPNVLSLVGSSKILHTERLGDLSITVMKDASNASCKVDSKI 427

Query: 410 DGIQTTGVDPKHLVERNLLKGITADENTAAHDITTLGIVNVRYCGYIAVVKV-RQESSNI 234
           DG+Q TG+D ++L+ERNLLKGITADENTAAHDI TLGIVNVRYCGY AVVKV   E  N+
Sbjct: 428 DGLQATGLDKRNLLERNLLKGITADENTAAHDIATLGIVNVRYCGYFAVVKVDGAEEKNV 487

Query: 233 GPPLKSKIEMIDQPDGGANALNINSLRLILHKRPPSEHNKTLPNSPKAEYEELDVTRRF 57
            PP +S IE ++QP+GGANALNINSLRL+LHK  PSE +K +P+    E E+L  ++ F
Sbjct: 488 RPPSQS-IE-LEQPEGGANALNINSLRLLLHKTIPSESSKPMPHLQTLESEDLSASQAF 544


>ref|XP_003528792.1| PREDICTED: uncharacterized protein LOC100808136 [Glycine max]
          Length = 1840

 Score =  204 bits (518), Expect = 1e-50
 Identities = 104/179 (58%), Positives = 131/179 (73%), Gaps = 1/179 (0%)
 Frame = -3

Query: 590 LFVDVAIFRAISSIWHVMETPCSTSSVGNTSILFSEEVGDLRISVRKDSSNASCKVDTKI 411
           LFVDVAIFRAI +I +VME P  + S+   +I+++E VGDL I+V KD S AS K+DTKI
Sbjct: 350 LFVDVAIFRAIKAIKYVMEEPKFSCSIVENNIIYTERVGDLNINVLKDVSVASYKIDTKI 409

Query: 410 DGIQTTGVDPKHLVERNLLKGITADENTAAHDITTLGIVNVRYCGYIAVVKV-RQESSNI 234
           D ++ TGV+ K L+ERN+LKGITADENTAAHDITTLG++NVRYCGY+  VKV R  + N+
Sbjct: 410 DRVEATGVNQKDLLERNILKGITADENTAAHDITTLGVINVRYCGYVVTVKVERGVNENV 469

Query: 233 GPPLKSKIEMIDQPDGGANALNINSLRLILHKRPPSEHNKTLPNSPKAEYEELDVTRRF 57
             P +  IE+ DQP+GGANALNINSLRL+LH   P E+NK +      E EE   +  F
Sbjct: 470 DSPSQQNIELFDQPEGGANALNINSLRLLLHNTTPPENNKPMSQIQTFESEEFGASHAF 528


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