BLASTX nr result
ID: Cimicifuga21_contig00037332
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00037332 (314 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281863.2| PREDICTED: cyclin-A2-2-like [Vitis vinifera] 62 5e-08 ref|XP_002309589.1| predicted protein [Populus trichocarpa] gi|2... 60 2e-07 ref|XP_002517534.1| cyclin A, putative [Ricinus communis] gi|223... 58 9e-07 ref|XP_002298132.1| predicted protein [Populus trichocarpa] gi|2... 58 9e-07 dbj|BAA09367.1| A-type cyclin [Nicotiana tabacum] 55 8e-06 >ref|XP_002281863.2| PREDICTED: cyclin-A2-2-like [Vitis vinifera] Length = 533 Score = 62.0 bits (149), Expect = 5e-08 Identities = 33/72 (45%), Positives = 45/72 (62%) Frame = +2 Query: 50 PASSTTAGIKHKRRAVLKDVTNICHESSYRGCISAAKIQTKSIKQEKIFSVKKDSKVAPV 229 P+++ AG++HKRRA LKDVTN+ E+SY CIS K++ K+ K K SKVA Sbjct: 102 PSATANAGLQHKRRAALKDVTNVVSENSYMNCISTTKVEIS--KRAKRGPSNKSSKVALT 159 Query: 230 VATKILPVKEDA 265 V + V+EDA Sbjct: 160 VLVETPQVQEDA 171 >ref|XP_002309589.1| predicted protein [Populus trichocarpa] gi|222855565|gb|EEE93112.1| predicted protein [Populus trichocarpa] Length = 495 Score = 60.1 bits (144), Expect = 2e-07 Identities = 33/70 (47%), Positives = 48/70 (68%) Frame = +2 Query: 53 ASSTTAGIKHKRRAVLKDVTNICHESSYRGCISAAKIQTKSIKQEKIFSVKKDSKVAPVV 232 AS++ AG KHKRRAVLKDV+NI E+S++ CI A K T + ++ K +++VA + Sbjct: 77 ASTSIAGFKHKRRAVLKDVSNIFCENSHQNCIHATKQYTSKLARK--CPPKTNAEVAARI 134 Query: 233 ATKILPVKED 262 + KI PV+ED Sbjct: 135 SMKISPVQED 144 >ref|XP_002517534.1| cyclin A, putative [Ricinus communis] gi|223543166|gb|EEF44698.1| cyclin A, putative [Ricinus communis] Length = 496 Score = 57.8 bits (138), Expect = 9e-07 Identities = 29/45 (64%), Positives = 35/45 (77%) Frame = +2 Query: 56 SSTTAGIKHKRRAVLKDVTNICHESSYRGCISAAKIQTKSIKQEK 190 ++T+A KRRAVL+DVTN+C ESSYR C SAAKIQ K+ KQ K Sbjct: 59 NNTSAIDNAKRRAVLRDVTNVCCESSYRSCFSAAKIQAKNGKQAK 103 >ref|XP_002298132.1| predicted protein [Populus trichocarpa] gi|222845390|gb|EEE82937.1| predicted protein [Populus trichocarpa] Length = 482 Score = 57.8 bits (138), Expect = 9e-07 Identities = 31/56 (55%), Positives = 39/56 (69%) Frame = +2 Query: 68 AGIKHKRRAVLKDVTNICHESSYRGCISAAKIQTKSIKQEKIFSVKKDSKVAPVVA 235 AG + KRRAVL+DVTN+C E+SY C SA KIQ K K+ ++ K SK+AP VA Sbjct: 65 AGNQRKRRAVLQDVTNVCCENSYTSCFSATKIQAKIAKKGQL----KVSKIAPSVA 116 >dbj|BAA09367.1| A-type cyclin [Nicotiana tabacum] Length = 493 Score = 54.7 bits (130), Expect = 8e-06 Identities = 28/68 (41%), Positives = 43/68 (63%) Frame = +2 Query: 56 SSTTAGIKHKRRAVLKDVTNICHESSYRGCISAAKIQTKSIKQEKIFSVKKDSKVAPVVA 235 SS G++ KRRAVLKD+ N+ HE+S+ CI+ +KIQ K S K+++K P V+ Sbjct: 69 SSIATGVQPKRRAVLKDMKNVLHENSHMNCINGSKIQVKK------GSDKRNNKAKPAVS 122 Query: 236 TKILPVKE 259 K+ ++E Sbjct: 123 LKLSQLQE 130