BLASTX nr result

ID: Cimicifuga21_contig00037332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037332
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281863.2| PREDICTED: cyclin-A2-2-like [Vitis vinifera]       62   5e-08
ref|XP_002309589.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002517534.1| cyclin A, putative [Ricinus communis] gi|223...    58   9e-07
ref|XP_002298132.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
dbj|BAA09367.1| A-type cyclin [Nicotiana tabacum]                      55   8e-06

>ref|XP_002281863.2| PREDICTED: cyclin-A2-2-like [Vitis vinifera]
          Length = 533

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/72 (45%), Positives = 45/72 (62%)
 Frame = +2

Query: 50  PASSTTAGIKHKRRAVLKDVTNICHESSYRGCISAAKIQTKSIKQEKIFSVKKDSKVAPV 229
           P+++  AG++HKRRA LKDVTN+  E+SY  CIS  K++    K+ K     K SKVA  
Sbjct: 102 PSATANAGLQHKRRAALKDVTNVVSENSYMNCISTTKVEIS--KRAKRGPSNKSSKVALT 159

Query: 230 VATKILPVKEDA 265
           V  +   V+EDA
Sbjct: 160 VLVETPQVQEDA 171


>ref|XP_002309589.1| predicted protein [Populus trichocarpa] gi|222855565|gb|EEE93112.1|
           predicted protein [Populus trichocarpa]
          Length = 495

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/70 (47%), Positives = 48/70 (68%)
 Frame = +2

Query: 53  ASSTTAGIKHKRRAVLKDVTNICHESSYRGCISAAKIQTKSIKQEKIFSVKKDSKVAPVV 232
           AS++ AG KHKRRAVLKDV+NI  E+S++ CI A K  T  + ++     K +++VA  +
Sbjct: 77  ASTSIAGFKHKRRAVLKDVSNIFCENSHQNCIHATKQYTSKLARK--CPPKTNAEVAARI 134

Query: 233 ATKILPVKED 262
           + KI PV+ED
Sbjct: 135 SMKISPVQED 144


>ref|XP_002517534.1| cyclin A, putative [Ricinus communis] gi|223543166|gb|EEF44698.1|
           cyclin A, putative [Ricinus communis]
          Length = 496

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/45 (64%), Positives = 35/45 (77%)
 Frame = +2

Query: 56  SSTTAGIKHKRRAVLKDVTNICHESSYRGCISAAKIQTKSIKQEK 190
           ++T+A    KRRAVL+DVTN+C ESSYR C SAAKIQ K+ KQ K
Sbjct: 59  NNTSAIDNAKRRAVLRDVTNVCCESSYRSCFSAAKIQAKNGKQAK 103


>ref|XP_002298132.1| predicted protein [Populus trichocarpa] gi|222845390|gb|EEE82937.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/56 (55%), Positives = 39/56 (69%)
 Frame = +2

Query: 68  AGIKHKRRAVLKDVTNICHESSYRGCISAAKIQTKSIKQEKIFSVKKDSKVAPVVA 235
           AG + KRRAVL+DVTN+C E+SY  C SA KIQ K  K+ ++    K SK+AP VA
Sbjct: 65  AGNQRKRRAVLQDVTNVCCENSYTSCFSATKIQAKIAKKGQL----KVSKIAPSVA 116


>dbj|BAA09367.1| A-type cyclin [Nicotiana tabacum]
          Length = 493

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/68 (41%), Positives = 43/68 (63%)
 Frame = +2

Query: 56  SSTTAGIKHKRRAVLKDVTNICHESSYRGCISAAKIQTKSIKQEKIFSVKKDSKVAPVVA 235
           SS   G++ KRRAVLKD+ N+ HE+S+  CI+ +KIQ K        S K+++K  P V+
Sbjct: 69  SSIATGVQPKRRAVLKDMKNVLHENSHMNCINGSKIQVKK------GSDKRNNKAKPAVS 122

Query: 236 TKILPVKE 259
            K+  ++E
Sbjct: 123 LKLSQLQE 130


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