BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037267
         (886 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32989.3| unnamed protein product [Vitis vinifera]              101   3e-35
ref|XP_003634851.1| PREDICTED: pentatricopeptide repeat-containi...   101   3e-35
emb|CAN77919.1| hypothetical protein VITISV_027645 [Vitis vinifera]   101   3e-35
ref|XP_002518506.1| pentatricopeptide repeat-containing protein,...   102   4e-35
ref|XP_004145104.1| PREDICTED: pentatricopeptide repeat-containi...   102   1e-34

>emb|CBI32989.3| unnamed protein product [Vitis vinifera]
          Length = 412

 Score =  101 bits (251), Expect(2) = 3e-35
 Identities = 53/105 (50%), Positives = 72/105 (68%)
 Frame = +1

Query: 4   EVSRIFNEFPKIYGITPDLDTYNLAIKALCESRSSSSVYSILDEMDREGCKPDSNTVSTI 183
           E +RIF EFPK YGI  +LD+YN  +KA  ES SSSS YSIL EM R+G KP++ +   +
Sbjct: 173 EANRIFLEFPKTYGIELNLDSYNTVLKAFSESGSSSSGYSILAEMGRKGVKPNATSFGIL 232

Query: 184 LAGFNKEEKHEEI*KVLELMEKHETQLVLRIYNNWIYRLCCQNKA 318
           LAGF  EEK+E++ KVL++ME+++ Q  +  YN  I  LC   K+
Sbjct: 233 LAGFYNEEKYEDVGKVLKMMEEYKMQPGISTYNIRIQSLCKLKKS 277



 Score = 74.3 bits (181), Expect(2) = 3e-35
 Identities = 35/82 (42%), Positives = 50/82 (60%)
 Frame = +3

Query: 306 SEQSHGLFEGISSRGVKPNGYTYAHLIIGFVEEGNGNEVRRDFNDISEKGVERDHICYTN 485
           S ++  L +GI +R +KPN  TY HLI GF +EGN +E ++ F D+  +G + D  CY  
Sbjct: 277 SSEAKALLDGILARRMKPNSETYCHLIHGFCKEGNLDEAKKLFKDMVNRGCKPDSDCYFT 336

Query: 486 LVKCLCKAGDFETVSWVCNDSM 551
           LV  LC+ GDFE+    C + M
Sbjct: 337 LVYFLCQGGDFESALRFCKECM 358


>ref|XP_003634851.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Vitis vinifera]
          Length = 396

 Score =  101 bits (251), Expect(2) = 3e-35
 Identities = 53/105 (50%), Positives = 72/105 (68%)
 Frame = +1

Query: 4   EVSRIFNEFPKIYGITPDLDTYNLAIKALCESRSSSSVYSILDEMDREGCKPDSNTVSTI 183
           E +RIF EFPK YGI  +LD+YN  +KA  ES SSSS YSIL EM R+G KP++ +   +
Sbjct: 157 EANRIFLEFPKTYGIELNLDSYNTVLKAFSESGSSSSGYSILAEMGRKGVKPNATSFGIL 216

Query: 184 LAGFNKEEKHEEI*KVLELMEKHETQLVLRIYNNWIYRLCCQNKA 318
           LAGF  EEK+E++ KVL++ME+++ Q  +  YN  I  LC   K+
Sbjct: 217 LAGFYNEEKYEDVGKVLKMMEEYKMQPGISTYNIRIQSLCKLKKS 261



 Score = 74.3 bits (181), Expect(2) = 3e-35
 Identities = 35/82 (42%), Positives = 50/82 (60%)
 Frame = +3

Query: 306 SEQSHGLFEGISSRGVKPNGYTYAHLIIGFVEEGNGNEVRRDFNDISEKGVERDHICYTN 485
           S ++  L +GI +R +KPN  TY HLI GF +EGN +E ++ F D+  +G + D  CY  
Sbjct: 261 SSEAKALLDGILARRMKPNSETYCHLIHGFCKEGNLDEAKKLFKDMVNRGCKPDSDCYFT 320

Query: 486 LVKCLCKAGDFETVSWVCNDSM 551
           LV  LC+ GDFE+    C + M
Sbjct: 321 LVYFLCQGGDFESALRFCKECM 342


>emb|CAN77919.1| hypothetical protein VITISV_027645 [Vitis vinifera]
          Length = 396

 Score =  101 bits (251), Expect(2) = 3e-35
 Identities = 53/105 (50%), Positives = 72/105 (68%)
 Frame = +1

Query: 4   EVSRIFNEFPKIYGITPDLDTYNLAIKALCESRSSSSVYSILDEMDREGCKPDSNTVSTI 183
           E +RIF EFPK YGI  +LD+YN  +KA  ES SSSS YSIL EM R+G KP++ +   +
Sbjct: 157 EANRIFLEFPKTYGIELNLDSYNTVLKAFSESGSSSSGYSILAEMGRKGVKPNATSFGIL 216

Query: 184 LAGFNKEEKHEEI*KVLELMEKHETQLVLRIYNNWIYRLCCQNKA 318
           LAGF  EEK+E++ KVL++ME+++ Q  +  YN  I  LC   K+
Sbjct: 217 LAGFYNEEKYEDVGKVLKMMEEYKMQPGISTYNIRIQSLCKLKKS 261



 Score = 74.3 bits (181), Expect(2) = 3e-35
 Identities = 35/82 (42%), Positives = 50/82 (60%)
 Frame = +3

Query: 306 SEQSHGLFEGISSRGVKPNGYTYAHLIIGFVEEGNGNEVRRDFNDISEKGVERDHICYTN 485
           S ++  L +GI +R +KPN  TY HLI GF +EGN +E ++ F D+  +G + D  CY  
Sbjct: 261 SSEAKALLDGILARRMKPNSETYCHLIHGFCKEGNLDEAKKLFKDMVNRGCKPDSDCYFT 320

Query: 486 LVKCLCKAGDFETVSWVCNDSM 551
           LV  LC+ GDFE+    C + M
Sbjct: 321 LVYFLCQGGDFESALRFCKECM 342


>ref|XP_002518506.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542351|gb|EEF43893.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 397

 Score =  102 bits (254), Expect(2) = 4e-35
 Identities = 54/107 (50%), Positives = 74/107 (69%), Gaps = 1/107 (0%)
 Frame = +1

Query: 1   SEVSRIFNEFPKIYGITPDLDTYNLAIKALCESRSSSSVYSILDEMDREGCKPDSNTVST 180
           SEV R+F EFPK Y I P+LD+YN  IK+ C+S SSSS +S+L EMDR+  KP++ T   
Sbjct: 156 SEVKRVFLEFPKNYNIEPNLDSYNTVIKSFCDSESSSSGFSVLAEMDRKRLKPNATTFGH 215

Query: 181 ILAGFNKEEKHEEI*KVLELM-EKHETQLVLRIYNNWIYRLCCQNKA 318
           +LAGF KEEK+E++ KVLE+M +K+  +  +  YN  I  LC   K+
Sbjct: 216 LLAGFYKEEKYEDVGKVLEMMKDKYGIRPGVSTYNIRIQSLCKLKKS 262



 Score = 72.8 bits (177), Expect(2) = 4e-35
 Identities = 35/82 (42%), Positives = 49/82 (59%)
 Frame = +3

Query: 306 SEQSHGLFEGISSRGVKPNGYTYAHLIIGFVEEGNGNEVRRDFNDISEKGVERDHICYTN 485
           S ++  L +G+ SR +KPN  TYAHLI GF  EG+    +R F D+  +G + D  CY  
Sbjct: 262 SAEAKALLDGMLSRQMKPNSVTYAHLIHGFCNEGDLEGGKRLFKDMVNRGYQPDSACYFT 321

Query: 486 LVKCLCKAGDFETVSWVCNDSM 551
           L+  LCK  DFET   +C +S+
Sbjct: 322 LLHYLCKGQDFETALRICKESI 343


>ref|XP_004145104.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Cucumis sativus]
           gi|449471723|ref|XP_004153390.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Cucumis sativus]
           gi|449530564|ref|XP_004172264.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Cucumis sativus]
          Length = 405

 Score =  102 bits (253), Expect(2) = 1e-34
 Identities = 54/100 (54%), Positives = 68/100 (68%)
 Frame = +1

Query: 4   EVSRIFNEFPKIYGITPDLDTYNLAIKALCESRSSSSVYSILDEMDREGCKPDSNTVSTI 183
           E+ R++ EFPKIYGI PD+DTYN  IKA  ES SSSSV SI+ EMDR+  KP++ T +  
Sbjct: 166 ELKRVYMEFPKIYGIEPDIDTYNRVIKAFSESGSSSSVSSIVAEMDRKDVKPNATTFANW 225

Query: 184 LAGFNKEEKHEEI*KVLELMEKHETQLVLRIYNNWIYRLC 303
           LAG   EEK E++ KVL LMEK+  +  +  YN  I  LC
Sbjct: 226 LAGCYMEEKFEDVEKVLNLMEKYGVRRGVATYNARIRSLC 265



 Score = 71.6 bits (174), Expect(2) = 1e-34
 Identities = 34/82 (41%), Positives = 48/82 (58%)
 Frame = +3

Query: 306 SEQSHGLFEGISSRGVKPNGYTYAHLIIGFVEEGNGNEVRRDFNDISEKGVERDHICYTN 485
           S ++  LF+G+ SRG+ PN  TY  LI GF +EGN +E +  F  +   G + D  CY  
Sbjct: 270 STEAKALFDGMLSRGMDPNSVTYCELIHGFCKEGNLDEAKSIFKRMINSGCQPDSECYFT 329

Query: 486 LVKCLCKAGDFETVSWVCNDSM 551
           L   LC+ GD+ET   +C +SM
Sbjct: 330 LTYFLCRGGDYETAFKICLESM 351