BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037248
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]   137   9e-31
gb|ADK92880.1| retrotransposon 4 protein [Hypericum perforatum]       119   3e-25
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas...   114   8e-24
emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]   114   8e-24
gb|AAG10812.1|AC018460_6 Putative retroelement polyprotein [Arab...   113   1e-23

>emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]
          Length = 1300

 Score =  137 bits (345), Expect = 9e-31
 Identities = 73/132 (55%), Positives = 84/132 (63%)
 Frame = +3

Query: 3   CPQTPQQNGVIERKLAHLTGISLSWLHAKNLPQELWAAAIQSACHVINCLLPWPGTKTSL 182
           C  TPQQNGV ERK  HL  I  S LHAKN+P   WA  +++A  VIN L       +S 
Sbjct: 569 CANTPQQNGVXERKNRHLAEICRSMLHAKNVPGXFWAEXMKTAAFVINRLPQQRLNFSSP 628

Query: 183 FEALYHRKPNVSYFRVFGSVCYVHVSKSSRTKLDPKAKRCIFVGYDSHRKG*RCMDLETN 362
           FE L++ KP VSYFRVFG VCYV V    R+K+D KA RC+ VGYDS RK  RC D  T 
Sbjct: 629 FEKLWNIKPTVSYFRVFGCVCYVFVPNHLRSKMDKKAVRCVLVGYDSQRKXWRCCDPTTG 688

Query: 363 KVVVSRDVVFDE 398
           K   SR+VVFDE
Sbjct: 689 KCYTSRNVVFDE 700


>gb|ADK92880.1| retrotransposon 4 protein [Hypericum perforatum]
          Length = 1347

 Score =  119 bits (298), Expect = 3e-25
 Identities = 57/132 (43%), Positives = 83/132 (62%)
 Frame = +3

Query: 3   CPQTPQQNGVIERKLAHLTGISLSWLHAKNLPQELWAAAIQSACHVINCLLPWPGTKTSL 182
           C  TPQQNGV ERK  HL  ++ + +   N+ +  W+ A+ +ACH+IN +     +  + 
Sbjct: 564 CVYTPQQNGVAERKNRHLLNVARAMMFKMNVKKRFWSDAVLTACHLINRIPSATTSGLAP 623

Query: 183 FEALYHRKPNVSYFRVFGSVCYVHVSKSSRTKLDPKAKRCIFVGYDSHRKG*RCMDLETN 362
            E L ++KP++SY RVFG  C+VHV    R KLD +A +CIF+GY  ++KG RC D E+ 
Sbjct: 624 IEILLNKKPDLSYLRVFGCCCFVHVPAGKRDKLDKRAVKCIFLGYSRNQKGYRCFDPESG 683

Query: 363 KVVVSRDVVFDE 398
           +  +SRDV F E
Sbjct: 684 QRFISRDVRFIE 695


>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
            Arabidopsis thaliana BAC gb|AF080119 and is a member of
            the reverse transcriptase family PF|00078 [Arabidopsis
            thaliana]
          Length = 1415

 Score =  114 bits (285), Expect = 8e-24
 Identities = 57/132 (43%), Positives = 81/132 (61%)
 Frame = +3

Query: 3    CPQTPQQNGVIERKLAHLTGISLSWLHAKNLPQELWAAAIQSACHVINCLLPWPGTKTSL 182
            CP TPQQNG+ ERK  HL  + LS L   + PQ+ W  +  +A ++IN L        S 
Sbjct: 606  CPYTPQQNGLAERKHRHLVELGLSMLFHSHTPQKFWVESFFTANYIINRLPSSVLKNLSP 665

Query: 183  FEALYHRKPNVSYFRVFGSVCYVHVSKSSRTKLDPKAKRCIFVGYDSHRKG*RCMDLETN 362
            +EAL+  KP+ S  RVFGS CY  +   ++ K DP++ +C+F+GY+S  KG RC    T 
Sbjct: 666  YEALFGEKPDYSSLRVFGSACYPCLRPLAQNKFDPRSLQCVFLGYNSQYKGYRCFYPPTG 725

Query: 363  KVVVSRDVVFDE 398
            KV +SR+V+F+E
Sbjct: 726  KVYISRNVIFNE 737


>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
          Length = 1424

 Score =  114 bits (285), Expect = 8e-24
 Identities = 59/130 (45%), Positives = 87/130 (66%), Gaps = 1/130 (0%)
 Frame = +3

Query: 12   TPQQNGVIERKLAHLTGISLSWLHAKNLPQELWAAAIQSACHVIN-CLLPWPGTKTSLFE 188
            TPQQNGV+ERK   +  ++ + L+ K LP+  WA A+ +A +++N C       KT + E
Sbjct: 689  TPQQNGVVERKNQTVMEMAKAMLYEKGLPKIFWAEAVNTAVYLLNRCPTKALLNKTPI-E 747

Query: 189  ALYHRKPNVSYFRVFGSVCYVHVSKSSRTKLDPKAKRCIFVGYDSHRKG*RCMDLETNKV 368
            A   RKP+V +F+VFG +CY  V K  R+KLD  +++CIF+GY S  KG R  +L+T K+
Sbjct: 748  AWSGRKPSVRHFKVFGCLCYSQVPKQRRSKLDETSEKCIFMGYSSQSKGYRLYNLKTXKL 807

Query: 369  VVSRDVVFDE 398
            ++SRDV+FDE
Sbjct: 808  IISRDVIFDE 817


>gb|AAG10812.1|AC018460_6 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1404

 Score =  113 bits (283), Expect = 1e-23
 Identities = 55/132 (41%), Positives = 81/132 (61%)
 Frame = +3

Query: 3   CPQTPQQNGVIERKLAHLTGISLSWLHAKNLPQELWAAAIQSACHVINCLLPWPGTKTSL 182
           CP TPQQNGV ERK  HL  ++ S +   ++P+  W  A+ +AC++IN       +  S 
Sbjct: 603 CPYTPQQNGVAERKNRHLMEVARSMMFHTSVPKRFWGDAVLTACYLINRTPTKVLSDLSP 662

Query: 183 FEALYHRKPNVSYFRVFGSVCYVHVSKSSRTKLDPKAKRCIFVGYDSHRKG*RCMDLETN 362
           FE L + KP + + RVFG VC+V +    R+KLD K+ +C+F+GY + +KG +C D   N
Sbjct: 663 FEVLNNTKPFIDHLRVFGCVCFVLIPGEQRSKLDAKSTKCMFLGYSTTQKGYKCFDPTKN 722

Query: 363 KVVVSRDVVFDE 398
           +  +SRDV F E
Sbjct: 723 RTFISRDVKFLE 734