BLASTX nr result

ID: Cimicifuga21_contig00037238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037238
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAZ06658.1| male sterility protein 2-2 [Brassica napus] gi|70...    74   2e-11
gb|AAQ81302.2| male sterility protein 2-1 mutant [Brassica napus]      74   2e-11
emb|CAA68190.1| male sterility protein 2 [Brassica napus] gi|324...    74   2e-11
ref|XP_003632062.1| PREDICTED: LOW QUALITY PROTEIN: fatty acyl-C...    74   2e-11
emb|CBI39168.3| unnamed protein product [Vitis vinifera]               74   2e-11

>gb|AAZ06658.1| male sterility protein 2-2 [Brassica napus]
           gi|70672848|gb|AAZ06659.1| male sterility protein 2-2
           [Brassica napus]
          Length = 616

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 8/93 (8%)
 Frame = +2

Query: 2   DSERRPVSIQRMKTFNSVNDYHSHLETKVIEMCA-----NSPKRKILARR---LHRSLDR 157
           DS+  P+ +  MK F+SV+D+  HL     E        +S   KIL +      +S+++
Sbjct: 489 DSKGVPIRVPLMKLFDSVDDFSDHLWRDAQERSGLMNGMDSSDSKILQKLKFICKKSIEQ 548

Query: 158 AMHLANIYEPYTFYEGRFDITNTHKLMDGLSQE 256
           A HLA IYEPYTFY GRFD +NTH+LM+ +S+E
Sbjct: 549 AKHLATIYEPYTFYGGRFDNSNTHRLMENMSEE 581


>gb|AAQ81302.2| male sterility protein 2-1 mutant [Brassica napus]
          Length = 616

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 8/93 (8%)
 Frame = +2

Query: 2   DSERRPVSIQRMKTFNSVNDYHSHLETKVIEMCA-----NSPKRKILARR---LHRSLDR 157
           DS+  P+ +  MK F+SV+D+  HL     E        +S   KIL +      +S+++
Sbjct: 489 DSKGVPIRVPLMKLFDSVDDFSDHLWRDAQERSGLMNGMDSSDSKILQKLKFICKKSIEQ 548

Query: 158 AMHLANIYEPYTFYEGRFDITNTHKLMDGLSQE 256
           A HLA IYEPYTFY GRFD +NTH+LM+ +S+E
Sbjct: 549 AKHLATIYEPYTFYGGRFDNSNTHRLMENMSEE 581


>emb|CAA68190.1| male sterility protein 2 [Brassica napus]
           gi|32441492|gb|AAP81865.1| male sterility protein 2
           [Brassica napus]
          Length = 616

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 8/93 (8%)
 Frame = +2

Query: 2   DSERRPVSIQRMKTFNSVNDYHSHLETKVIEMCA-----NSPKRKILARR---LHRSLDR 157
           DS+  P+ +  MK F+SV+D+  HL     E        +S   KIL +      +S+++
Sbjct: 489 DSKGVPIRVPLMKLFDSVDDFSDHLWRDAQERSGLMNGMDSSDSKILQKLKFICKKSIEQ 548

Query: 158 AMHLANIYEPYTFYEGRFDITNTHKLMDGLSQE 256
           A HLA IYEPYTFY GRFD +NTH+LM+ +S+E
Sbjct: 549 AKHLATIYEPYTFYGGRFDNSNTHRLMENMSEE 581


>ref|XP_003632062.1| PREDICTED: LOW QUALITY PROTEIN: fatty acyl-CoA reductase 2-like
           [Vitis vinifera]
          Length = 606

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 32/89 (35%), Positives = 60/89 (67%), Gaps = 4/89 (4%)
 Frame = +2

Query: 2   DSERRPVSIQRMKTFNSVNDYHSHLETKVIEMCANSPKRKILARRLHRS----LDRAMHL 169
           D+E + V ++ MK F+ ++D+ SH++T++++    +      ++RL R     ++ A++L
Sbjct: 480 DTEGKTVDMKEMKIFSPMDDFSSHMQTEIVQQRRLTISGNKASQRLERKCKMIVEHAINL 539

Query: 170 ANIYEPYTFYEGRFDITNTHKLMDGLSQE 256
           A +Y+PY F+ GRFD +NTH LM+G+S+E
Sbjct: 540 ARVYQPYMFFRGRFDNSNTHNLMEGMSEE 568


>emb|CBI39168.3| unnamed protein product [Vitis vinifera]
          Length = 212

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 32/89 (35%), Positives = 60/89 (67%), Gaps = 4/89 (4%)
 Frame = +2

Query: 2   DSERRPVSIQRMKTFNSVNDYHSHLETKVIEMCANSPKRKILARRLHRS----LDRAMHL 169
           D+E + V ++ MK F+ ++D+ SH++T++++    +      ++RL R     ++ A++L
Sbjct: 86  DTEGKTVDMKEMKIFSPMDDFSSHMQTEIVQQRRLTISGNKASQRLERKCKMIVEHAINL 145

Query: 170 ANIYEPYTFYEGRFDITNTHKLMDGLSQE 256
           A +Y+PY F+ GRFD +NTH LM+G+S+E
Sbjct: 146 ARVYQPYMFFRGRFDNSNTHNLMEGMSEE 174


Top