BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037114
         (750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [...   269   5e-70
ref|XP_002318955.1| predicted protein [Populus trichocarpa] gi|2...   267   2e-69
ref|XP_002278016.2| PREDICTED: RNA pseudourine synthase 1-like [...   266   4e-69
emb|CBI39587.3| unnamed protein product [Vitis vinifera]              266   4e-69
ref|XP_003555184.1| PREDICTED: RNA pseudourine synthase 1-like [...   258   9e-67

>ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223548464|gb|EEF49955.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 321

 Score =  269 bits (687), Expect = 5e-70
 Identities = 132/189 (69%), Positives = 150/189 (79%)
 Frame = -3

Query: 748 LVQAFTQHMITKTYIALCIGTAPSWDKISIKSGHGRSKFGVWRVYAASDVGRILPGGSSV 569
           LV+AFT H I KTYIALCIG AP W+KI+IKSGHGRSKFGVWRVYAASDVG+ LPGGS+V
Sbjct: 134 LVKAFTDHKIKKTYIALCIGLAPKWEKITIKSGHGRSKFGVWRVYAASDVGQTLPGGSTV 193

Query: 568 RDMATAFEVLSVNRQGSFKEPANSRPDSKIIQNVNTAAPHDEDNNDDEVLVRAYPQSGRT 389
           +DM T+FE+LSVN QGSFKE +    D  I+  V   A  + D    E+LVRA+PQSGRT
Sbjct: 194 KDMETSFELLSVNGQGSFKELSEFEKDENILV-VEEKAAKNADVKKVEILVRAFPQSGRT 252

Query: 388 HQIRLHCQYLGIPIRGDVKYQGVHEWRGTTFDAHALHAETLWFEHPVTGHQLEFRAPLPS 209
           HQIRLHCQYLGI IRGDVKY+GV+EW G T+D H LHAETL FEHPVTG  +  RAPLPS
Sbjct: 253 HQIRLHCQYLGISIRGDVKYEGVYEWEGRTYDGHELHAETLSFEHPVTGVPVMLRAPLPS 312

Query: 208 WATQALQPV 182
           WA QA QP+
Sbjct: 313 WAIQASQPL 321


>ref|XP_002318955.1| predicted protein [Populus trichocarpa] gi|222857331|gb|EEE94878.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score =  267 bits (682), Expect = 2e-69
 Identities = 128/184 (69%), Positives = 149/184 (80%)
 Frame = -3

Query: 748 LVQAFTQHMITKTYIALCIGTAPSWDKISIKSGHGRSKFGVWRVYAASDVGRILPGGSSV 569
           LV+AFT H + KTYIALCIG+AP W+KI+IKSGHGRSKFG +RVYAASDVGR LPGGS+V
Sbjct: 71  LVKAFTDHKVRKTYIALCIGSAPKWEKITIKSGHGRSKFGAFRVYAASDVGRSLPGGSTV 130

Query: 568 RDMATAFEVLSVNRQGSFKEPANSRPDSKIIQNVNTAAPHDEDNNDDEVLVRAYPQSGRT 389
           +DM T+FEVLS+N QGSF+EP+    D  I+  V   A  D D   DE+LVRA+P+SGRT
Sbjct: 131 KDMETSFEVLSINGQGSFREPSEFNSDKNILV-VEEKAVIDTDAKKDEILVRAFPRSGRT 189

Query: 388 HQIRLHCQYLGIPIRGDVKYQGVHEWRGTTFDAHALHAETLWFEHPVTGHQLEFRAPLPS 209
           HQIRLHCQYLGIPIRGDVKY+GV EW+G T+D H LHAE+L  EHPVTG  L FRAPLP 
Sbjct: 190 HQIRLHCQYLGIPIRGDVKYEGVCEWKGRTYDGHELHAESLSLEHPVTGQPLMFRAPLPV 249

Query: 208 WATQ 197
           WAT+
Sbjct: 250 WATR 253


>ref|XP_002278016.2| PREDICTED: RNA pseudourine synthase 1-like [Vitis vinifera]
          Length = 348

 Score =  266 bits (679), Expect = 4e-69
 Identities = 124/190 (65%), Positives = 149/190 (78%)
 Frame = -3

Query: 748 LVQAFTQHMITKTYIALCIGTAPSWDKISIKSGHGRSKFGVWRVYAASDVGRILPGGSSV 569
           L++AF+   +TKTY+ALCIG AP+W+KI+IKSGHGRSKFG WRVYAASDVGR LP   ++
Sbjct: 158 LMKAFSDRKVTKTYLALCIGAAPTWEKITIKSGHGRSKFGAWRVYAASDVGRALPNAPAI 217

Query: 568 RDMATAFEVLSVNRQGSFKEPANSRPDSKIIQNVNTAAPHDEDNNDDEVLVRAYPQSGRT 389
           +DM T+FEVLSVN QG+ KE   SR   + +  V   +  D +   DE+LVRA+P+SGRT
Sbjct: 218 KDMVTSFEVLSVNGQGNVKELPESRKADETVLVVEERSVIDSNARQDEILVRAFPRSGRT 277

Query: 388 HQIRLHCQYLGIPIRGDVKYQGVHEWRGTTFDAHALHAETLWFEHPVTGHQLEFRAPLPS 209
           HQIRLHCQYLGI IRGDVKY+GVHEW+G  +D H LHAE+L FEHPVTG  + FRAPLPS
Sbjct: 278 HQIRLHCQYLGISIRGDVKYEGVHEWKGKIYDGHELHAESLSFEHPVTGVDVAFRAPLPS 337

Query: 208 WATQALQPVP 179
           WA QALQP P
Sbjct: 338 WAVQALQPSP 347


>emb|CBI39587.3| unnamed protein product [Vitis vinifera]
          Length = 274

 Score =  266 bits (679), Expect = 4e-69
 Identities = 124/190 (65%), Positives = 149/190 (78%)
 Frame = -3

Query: 748 LVQAFTQHMITKTYIALCIGTAPSWDKISIKSGHGRSKFGVWRVYAASDVGRILPGGSSV 569
           L++AF+   +TKTY+ALCIG AP+W+KI+IKSGHGRSKFG WRVYAASDVGR LP   ++
Sbjct: 84  LMKAFSDRKVTKTYLALCIGAAPTWEKITIKSGHGRSKFGAWRVYAASDVGRALPNAPAI 143

Query: 568 RDMATAFEVLSVNRQGSFKEPANSRPDSKIIQNVNTAAPHDEDNNDDEVLVRAYPQSGRT 389
           +DM T+FEVLSVN QG+ KE   SR   + +  V   +  D +   DE+LVRA+P+SGRT
Sbjct: 144 KDMVTSFEVLSVNGQGNVKELPESRKADETVLVVEERSVIDSNARQDEILVRAFPRSGRT 203

Query: 388 HQIRLHCQYLGIPIRGDVKYQGVHEWRGTTFDAHALHAETLWFEHPVTGHQLEFRAPLPS 209
           HQIRLHCQYLGI IRGDVKY+GVHEW+G  +D H LHAE+L FEHPVTG  + FRAPLPS
Sbjct: 204 HQIRLHCQYLGISIRGDVKYEGVHEWKGKIYDGHELHAESLSFEHPVTGVDVAFRAPLPS 263

Query: 208 WATQALQPVP 179
           WA QALQP P
Sbjct: 264 WAVQALQPSP 273


>ref|XP_003555184.1| PREDICTED: RNA pseudourine synthase 1-like [Glycine max]
          Length = 320

 Score =  258 bits (659), Expect = 9e-67
 Identities = 121/191 (63%), Positives = 151/191 (79%), Gaps = 3/191 (1%)
 Frame = -3

Query: 748 LVQAFTQHMITKTYIALCIGTAPSWDKISIKSGHGRSKFGVWRVYAASDVGRILPGGSSV 569
           LV+AFT H + KTYIALC G  P+W++++++SGHGRSKFG WRVYAASDVGR LPGGS V
Sbjct: 130 LVKAFTDHKVKKTYIALCTGPPPNWERVTLRSGHGRSKFGAWRVYAASDVGRALPGGSVV 189

Query: 568 RDMATAFEVLSVNRQGSFKEPANSR---PDSKIIQNVNTAAPHDEDNNDDEVLVRAYPQS 398
           R M T+FE+LSVNR+G+F+E ++S     + + +  V   A  ++ NN+ E++VRAYP+S
Sbjct: 190 RSMETSFELLSVNRKGNFREVSDSEFGNVEGENVLVVEEKAVKEDGNNESEIVVRAYPRS 249

Query: 397 GRTHQIRLHCQYLGIPIRGDVKYQGVHEWRGTTFDAHALHAETLWFEHPVTGHQLEFRAP 218
           GRTHQIRLHCQYLGI I GDVKY+GV+EW+GTT  AH LHAETL FEHPVTG  ++ RAP
Sbjct: 250 GRTHQIRLHCQYLGISIVGDVKYEGVYEWKGTTHHAHHLHAETLSFEHPVTGLHVKLRAP 309

Query: 217 LPSWATQALQP 185
           LP WAT A QP
Sbjct: 310 LPPWATHAFQP 320