BLASTX nr result

ID: Cimicifuga21_contig00037094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037094
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18917.3| unnamed protein product [Vitis vinifera]               92   3e-17
ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containi...    92   3e-17
emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]    92   3e-17
ref|XP_002307751.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
ref|XP_002523825.1| pentatricopeptide repeat-containing protein,...    86   2e-15

>emb|CBI18917.3| unnamed protein product [Vitis vinifera]
          Length = 496

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 43/48 (89%), Positives = 47/48 (97%)
 Frame = -1

Query: 322 EMIEEKCLKPSLPIYEMVLQHLRKAGQIKKHEELVEKMVDRGFVTRPL 179
           EMIEEKCL+PSLP+YEMVLQ LRKAGQ+KKHEELVEKMV+RGFVTRPL
Sbjct: 449 EMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKMVNRGFVTRPL 496


>ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Vitis vinifera]
          Length = 531

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 43/48 (89%), Positives = 47/48 (97%)
 Frame = -1

Query: 322 EMIEEKCLKPSLPIYEMVLQHLRKAGQIKKHEELVEKMVDRGFVTRPL 179
           EMIEEKCL+PSLP+YEMVLQ LRKAGQ+KKHEELVEKMV+RGFVTRPL
Sbjct: 484 EMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKMVNRGFVTRPL 531


>emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
          Length = 1563

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 43/48 (89%), Positives = 47/48 (97%)
 Frame = -1

Query: 322  EMIEEKCLKPSLPIYEMVLQHLRKAGQIKKHEELVEKMVDRGFVTRPL 179
            EMIEEKCL+PSLP+YEMVLQ LRKAGQ+KKHEELVEKMV+RGFVTRPL
Sbjct: 1516 EMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKMVNRGFVTRPL 1563


>ref|XP_002307751.1| predicted protein [Populus trichocarpa] gi|222857200|gb|EEE94747.1|
           predicted protein [Populus trichocarpa]
          Length = 480

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 42/48 (87%), Positives = 47/48 (97%)
 Frame = -1

Query: 322 EMIEEKCLKPSLPIYEMVLQHLRKAGQIKKHEELVEKMVDRGFVTRPL 179
           EMI+EKCL+PSLP+Y+MVLQ LRKAGQ+KKHEELVEKMVDRGFVTRPL
Sbjct: 433 EMIDEKCLRPSLPVYDMVLQQLRKAGQLKKHEELVEKMVDRGFVTRPL 480


>ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536913|gb|EEF38551.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 528

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 40/48 (83%), Positives = 43/48 (89%)
 Frame = -1

Query: 322 EMIEEKCLKPSLPIYEMVLQHLRKAGQIKKHEELVEKMVDRGFVTRPL 179
           EM+EEKCLKPSLP+YE VLQ LRKAGQ+KKHEELV  MVDRGF TRPL
Sbjct: 481 EMVEEKCLKPSLPVYEKVLQQLRKAGQLKKHEELVAVMVDRGFATRPL 528


Top