BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037031
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containi...   106   2e-21
ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containi...   104   8e-21
ref|XP_003623891.1| Pentatricopeptide repeat-containing protein ...   102   3e-20
ref|XP_003575504.1| PREDICTED: pentatricopeptide repeat-containi...   101   5e-20
gb|AEP33757.1| organelle transcript processing 82, partial [Aeth...   100   2e-19

>ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06145-like [Cucumis sativus]
          Length = 600

 Score =  106 bits (264), Expect = 2e-21
 Identities = 45/102 (44%), Positives = 72/102 (70%)
 Frame = +2

Query: 2   EAARRIIDEMVERDSISWTTMIAGYTNHGNMPEAQLLFDRMPKKDVSSWNALITCYSHSG 181
           ++AR++ +EM ER++ +W TMI GYT  GN+  A+LLF++MP KD+ SW  +ITCYS + 
Sbjct: 221 DSARKLFEEMPERNTATWNTMIDGYTRLGNVESAELLFNQMPTKDIISWTTMITCYSQNK 280

Query: 182 DWHKSLQLFHEMCLKKFKPNQVTLAVVFSVCGHMGSLEMAKQ 307
            +  +L ++ EM L    P++VT++ V S C H+G+LE+ K+
Sbjct: 281 QYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKE 322


>ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06145-like [Cucumis sativus]
          Length = 697

 Score =  104 bits (259), Expect = 8e-21
 Identities = 44/102 (43%), Positives = 71/102 (69%)
 Frame = +2

Query: 2   EAARRIIDEMVERDSISWTTMIAGYTNHGNMPEAQLLFDRMPKKDVSSWNALITCYSHSG 181
           ++AR++ +EM ER++ +W TMI GY   GN+  A+LLF++MP KD+ SW  +ITCYS + 
Sbjct: 318 DSARKLFEEMPERNTATWNTMIDGYARLGNVESAELLFNQMPTKDIISWTTMITCYSQNK 377

Query: 182 DWHKSLQLFHEMCLKKFKPNQVTLAVVFSVCGHMGSLEMAKQ 307
            +  +L ++ EM L    P++VT++ V S C H+G+LE+ K+
Sbjct: 378 QYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKE 419


>ref|XP_003623891.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355498906|gb|AES80109.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1288

 Score =  102 bits (254), Expect = 3e-20
 Identities = 44/101 (43%), Positives = 70/101 (69%)
 Frame = +2

Query: 2    EAARRIIDEMVERDSISWTTMIAGYTNHGNMPEAQLLFDRMPKKDVSSWNALITCYSHSG 181
            + ARR+ D M +R+ +SW  MI GY   GN+  A+ LFD MP +DV SW ++I+ YS +G
Sbjct: 948  DLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDDMPHRDVISWTSMISSYSQAG 1007

Query: 182  DWHKSLQLFHEMCLKKFKPNQVTLAVVFSVCGHMGSLEMAK 304
             + K+++LF EM + K KP+++T+A V S C H+G+L++ +
Sbjct: 1008 QFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDVGE 1048


>ref|XP_003575504.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Brachypodium distachyon]
          Length = 548

 Score =  101 bits (252), Expect = 5e-20
 Identities = 46/102 (45%), Positives = 70/102 (68%)
 Frame = +2

Query: 2   EAARRIIDEMVERDSISWTTMIAGYTNHGNMPEAQLLFDRMPKKDVSSWNALITCYSHSG 181
           EAAR++ D MVERDSISW T+++GY   G+   A+ LFD MP+++V+SWN +I+  S  G
Sbjct: 191 EAARQVFDGMVERDSISWNTLMSGYLRRGDAGLARDLFDEMPQRNVNSWNMMISACSEVG 250

Query: 182 DWHKSLQLFHEMCLKKFKPNQVTLAVVFSVCGHMGSLEMAKQ 307
            W  S+ +F++M    F+P+  T+AV+ S C  +G L +A+Q
Sbjct: 251 LWADSVAVFNQMRFMSFRPDAATMAVLMSACAQLGFLSVARQ 292



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/91 (31%), Positives = 46/91 (50%)
 Frame = +2

Query: 32  VERDSISWTTMIAGYTNHGNMPEAQLLFDRMPKKDVSSWNALITCYSHSGDWHKSLQLFH 211
           VE +     +++  +   G   EA LLF  M  KDV S+N +++  +H G    +L+LF 
Sbjct: 302 VEMNCHVHNSLVDMFAKCGCFSEAHLLFAEMDPKDVVSYNVMVSALAHHGHGKDALKLFE 361

Query: 212 EMCLKKFKPNQVTLAVVFSVCGHMGSLEMAK 304
           +M     +P+ VT   V S C H G ++  K
Sbjct: 362 QMIEGGLQPDAVTFLGVLSACAHAGLVDSGK 392


>gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 45/102 (44%), Positives = 68/102 (66%)
 Frame = +2

Query: 2   EAARRIIDEMVERDSISWTTMIAGYTNHGNMPEAQLLFDRMPKKDVSSWNALITCYSHSG 181
           E A ++ D    RD +S+T MI GY + GNM +AQ +FD +P KDV SWNA+I+ Y+  G
Sbjct: 130 EDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIG 189

Query: 182 DWHKSLQLFHEMCLKKFKPNQVTLAVVFSVCGHMGSLEMAKQ 307
            + ++L+LF+EM     KP++ T+A V S C H G++E+ +Q
Sbjct: 190 RYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQ 231



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/77 (33%), Positives = 42/77 (54%)
 Frame = +2

Query: 74  YTNHGNMPEAQLLFDRMPKKDVSSWNALITCYSHSGDWHKSLQLFHEMCLKKFKPNQVTL 253
           Y+  G M  A  LF+ +  KDV SWN LI  Y++     ++L +F EM      PN VT+
Sbjct: 255 YSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTM 314

Query: 254 AVVFSVCGHMGSLEMAK 304
             +   C H+G++++ +
Sbjct: 315 LSILPACAHLGAIDIGR 331