BLASTX nr result

ID: Cimicifuga21_contig00036867 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036867
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACS69068.1| CULLIN1-like protein 1 [Lilium longiflorum]            258   5e-67
ref|XP_002330364.1| predicted protein [Populus trichocarpa] gi|2...   257   8e-67
gb|AFJ21665.1| cullin 1-like protein B [Prunus avium]                 256   1e-66
ref|XP_002272195.1| PREDICTED: cullin-1 isoform 1 [Vitis vinifer...   256   1e-66
emb|CCH26221.1| CUL1 protein [Pyrus x bretschneideri]                 256   2e-66

>gb|ACS69068.1| CULLIN1-like protein 1 [Lilium longiflorum]
          Length = 744

 Score =  258 bits (658), Expect = 5e-67
 Identities = 128/157 (81%), Positives = 141/157 (89%)
 Frame = -2

Query: 523  LFNDSDRWSYSEIKSQLNLTDEDVLRLLHSLSCAKYKILNKEPNTKIISPSDIFEFNSKF 344
            LFN SDR SYSEI SQLNLTD+DV+RLLHSLSCAKYKILNKEPNTK ISP+D FEFNSKF
Sbjct: 588  LFNASDRLSYSEIMSQLNLTDDDVVRLLHSLSCAKYKILNKEPNTKSISPTDYFEFNSKF 647

Query: 343  TDKMRRIRIPVPLVDEKKKVIETVDKDRRFIIDASLVRIMKSRKALDHQQLVMECVEQLR 164
            TDKMRRI+IP+P VDEK+KVIE VDKDRR+ IDAS+VRIMKSRK L HQQLVMECVEQL 
Sbjct: 648  TDKMRRIKIPLPPVDEKRKVIEDVDKDRRYAIDASIVRIMKSRKVLGHQQLVMECVEQLG 707

Query: 163  KMFKPDLKVIKKRIEELIARDYLVRDADKPNVYKYLA 53
            +MFKPD K IKKRIE+LI+R+YL RD D PN+YKYLA
Sbjct: 708  RMFKPDFKAIKKRIEDLISREYLERDKDNPNLYKYLA 744


>ref|XP_002330364.1| predicted protein [Populus trichocarpa] gi|222871568|gb|EEF08699.1|
            predicted protein [Populus trichocarpa]
          Length = 744

 Score =  257 bits (656), Expect = 8e-67
 Identities = 127/157 (80%), Positives = 141/157 (89%)
 Frame = -2

Query: 523  LFNDSDRWSYSEIKSQLNLTDEDVLRLLHSLSCAKYKILNKEPNTKIISPSDIFEFNSKF 344
            LFN SDR SYSEI +QLNLTD+DV+RLLHSLSCAKYKILNKEPNTKIISP+D FEFNSKF
Sbjct: 588  LFNSSDRLSYSEIMTQLNLTDDDVVRLLHSLSCAKYKILNKEPNTKIISPTDHFEFNSKF 647

Query: 343  TDKMRRIRIPVPLVDEKKKVIETVDKDRRFIIDASLVRIMKSRKALDHQQLVMECVEQLR 164
            TDKMRRI+IP+P VDEKKKVIE VDKDRR+ IDAS+VRIMKSRK L HQQLVMECVEQL 
Sbjct: 648  TDKMRRIKIPLPPVDEKKKVIEDVDKDRRYAIDASIVRIMKSRKVLGHQQLVMECVEQLG 707

Query: 163  KMFKPDLKVIKKRIEELIARDYLVRDADKPNVYKYLA 53
            +MFKPD K IKKRIE+LI RDYL RD + PN+++YLA
Sbjct: 708  RMFKPDFKAIKKRIEDLITRDYLERDKENPNLFRYLA 744


>gb|AFJ21665.1| cullin 1-like protein B [Prunus avium]
          Length = 744

 Score =  256 bits (654), Expect = 1e-66
 Identities = 126/157 (80%), Positives = 140/157 (89%)
 Frame = -2

Query: 523  LFNDSDRWSYSEIKSQLNLTDEDVLRLLHSLSCAKYKILNKEPNTKIISPSDIFEFNSKF 344
            LFN SDR SYSEI +QLNLTD+DV+RLLHSLSCAKYKILNKEPNTK +SP+D FEFNSKF
Sbjct: 588  LFNTSDRLSYSEIMTQLNLTDDDVVRLLHSLSCAKYKILNKEPNTKTLSPTDYFEFNSKF 647

Query: 343  TDKMRRIRIPVPLVDEKKKVIETVDKDRRFIIDASLVRIMKSRKALDHQQLVMECVEQLR 164
            TDKMRRI+IP+P VDEKKKVIE VDKDRR+ IDAS+VRIMKSRK L HQQLVMECVEQL 
Sbjct: 648  TDKMRRIKIPLPPVDEKKKVIEDVDKDRRYAIDASIVRIMKSRKVLGHQQLVMECVEQLG 707

Query: 163  KMFKPDLKVIKKRIEELIARDYLVRDADKPNVYKYLA 53
            +MFKPD K IKKRIE+LI RDYL RD D PN+++YLA
Sbjct: 708  RMFKPDFKAIKKRIEDLITRDYLERDKDNPNLFRYLA 744


>ref|XP_002272195.1| PREDICTED: cullin-1 isoform 1 [Vitis vinifera]
            gi|297736859|emb|CBI26060.3| unnamed protein product
            [Vitis vinifera]
          Length = 744

 Score =  256 bits (654), Expect = 1e-66
 Identities = 127/157 (80%), Positives = 139/157 (88%)
 Frame = -2

Query: 523  LFNDSDRWSYSEIKSQLNLTDEDVLRLLHSLSCAKYKILNKEPNTKIISPSDIFEFNSKF 344
            LFN SDR SYSEI +QLNLTD+DV+RLLHSLSCAKYKILNKEPNTK ISP+D FEFNSKF
Sbjct: 588  LFNASDRLSYSEIMTQLNLTDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDYFEFNSKF 647

Query: 343  TDKMRRIRIPVPLVDEKKKVIETVDKDRRFIIDASLVRIMKSRKALDHQQLVMECVEQLR 164
            TDKMRRI+IP+P VDEKKKVIE VDKDRR+ IDAS+VRIMKSRK L HQQLVMECVEQL 
Sbjct: 648  TDKMRRIKIPLPPVDEKKKVIEDVDKDRRYAIDASIVRIMKSRKVLGHQQLVMECVEQLG 707

Query: 163  KMFKPDLKVIKKRIEELIARDYLVRDADKPNVYKYLA 53
            +MFKPD K IKKRIE+LI RDYL RD D PN ++YLA
Sbjct: 708  RMFKPDFKAIKKRIEDLITRDYLERDKDNPNTFRYLA 744


>emb|CCH26221.1| CUL1 protein [Pyrus x bretschneideri]
          Length = 744

 Score =  256 bits (653), Expect = 2e-66
 Identities = 126/157 (80%), Positives = 140/157 (89%)
 Frame = -2

Query: 523  LFNDSDRWSYSEIKSQLNLTDEDVLRLLHSLSCAKYKILNKEPNTKIISPSDIFEFNSKF 344
            LFN SDR SYSEI +QLNLTD+DV+RLLHSLSCAKYKILNKEPNTK ISP+D FEFN+KF
Sbjct: 588  LFNTSDRLSYSEIMTQLNLTDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDYFEFNAKF 647

Query: 343  TDKMRRIRIPVPLVDEKKKVIETVDKDRRFIIDASLVRIMKSRKALDHQQLVMECVEQLR 164
            TDKMRRI+IP+P VDEKKKVIE VDKDRR+ IDAS+VRIMKSRK L HQQLVMECVEQL 
Sbjct: 648  TDKMRRIKIPLPPVDEKKKVIEDVDKDRRYAIDASIVRIMKSRKVLGHQQLVMECVEQLG 707

Query: 163  KMFKPDLKVIKKRIEELIARDYLVRDADKPNVYKYLA 53
            +MFKPD K IKKRIE+LI RDYL RD D PN+++YLA
Sbjct: 708  RMFKPDFKAIKKRIEDLITRDYLERDKDNPNLFRYLA 744


Top