BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036389
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containi...   105   5e-21
ref|XP_002518060.1| pentatricopeptide repeat-containing protein,...    95   5e-18
ref|XP_002328242.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002866485.1| pentatricopeptide repeat-containing protein ...    90   2e-16
ref|XP_002312829.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-16

>ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g62370-like [Vitis vinifera]
          Length = 1101

 Score =  105 bits (261), Expect = 5e-21
 Identities = 60/153 (39%), Positives = 87/153 (56%)
 Frame = +1

Query: 13  RLFFFPKPNTNTNANDXXXXXXXXXXXXXXXXXXVDPLNSSPSPLSEDNKALCFSLADKY 192
           RLFF PK N  T +                    +DP  SS +P +E +  LCF+L D+ 
Sbjct: 10  RLFFTPKKNLATCS------------------PALDPPPSS-APTTEHHNKLCFTLTDRL 50

Query: 193 LTRGLISSANGIIDRIIKRSSSVTDTISAVDFAISRGLDLNSINIAALIQKIVTLGQPHI 372
           + RG++S    ++ R+IK+S SV+D I AV+FA +RGL+L+S     L++K+V  G+   
Sbjct: 51  IRRGVLSLGQQVVRRMIKQSPSVSDAILAVEFAAARGLELDSCGYGVLLRKLVGSGEHRF 110

Query: 373 AETVYNHTIVSRGIAPVPSILQSMIIFYCRLGK 471
           AE VY   +++RGI P    L SM+I YC LGK
Sbjct: 111 AEAVYRDYVIARGIIPDSETLNSMVICYCNLGK 143


>ref|XP_002518060.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542656|gb|EEF44193.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 402

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 54/109 (49%), Positives = 72/109 (66%)
 Frame = +1

Query: 145 LSEDNKALCFSLADKYLTRGLISSANGIIDRIIKRSSSVTDTISAVDFAISRGLDLNSIN 324
           L   +K LCFSLA+    RG ++SA  II RI+  SS+V D IS VDFA SRG++L+   
Sbjct: 37  LPNGHKTLCFSLAENLFRRGRLASAQEIIQRIVTDSSTVPDAISTVDFAASRGINLSVGI 96

Query: 325 IAALIQKIVTLGQPHIAETVYNHTIVSRGIAPVPSILQSMIIFYCRLGK 471
            AA ++K+V LG+P+ A TVY  +I +R I P  SI  SMII + +LGK
Sbjct: 97  YAAFVRKLVDLGEPNFAYTVYCESI-NRSIQPNASITNSMIICFVKLGK 144


>ref|XP_002328242.1| predicted protein [Populus trichocarpa] gi|222837757|gb|EEE76122.1|
           predicted protein [Populus trichocarpa]
          Length = 893

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 48/112 (42%), Positives = 68/112 (60%)
 Frame = +1

Query: 136 PSPLSEDNKALCFSLADKYLTRGLISSANGIIDRIIKRSSSVTDTISAVDFAISRGLDLN 315
           P P+  D+ +LC SL    L RGL+SSA  ++ R I  S +V D ISAV+FA + G+DL 
Sbjct: 30  PQPIPNDHTSLCQSLVHDLLRRGLLSSAQQVVQRFIASSPTVHDAISAVEFASASGMDLG 89

Query: 316 SINIAALIQKIVTLGQPHIAETVYNHTIVSRGIAPVPSILQSMIIFYCRLGK 471
                 LI+K+V LG P  A   Y+  +V+RGI P  +I+ S++I   +LGK
Sbjct: 90  PGISGELIRKLVDLGHPLSAREFYHDLVVARGIEPDSNIVNSLVICLAKLGK 141


>ref|XP_002866485.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297312320|gb|EFH42744.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 983

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 44/109 (40%), Positives = 68/109 (62%)
 Frame = +1

Query: 139 SPLSEDNKALCFSLADKYLTRGLISSANGIIDRIIKRSSSVTDTISAVDFAISRGLDLNS 318
           S  S D+++ C SL  K   RGL++SA  +I R+I   SS+++  S  DFA++ G++L+S
Sbjct: 37  SAASGDHRSRCLSLIVKLGRRGLVNSAREVIRRVIDGCSSISEAASVADFAVNNGIELDS 96

Query: 319 INIAALIQKIVTLGQPHIAETVYNHTIVSRGIAPVPSILQSMIIFYCRL 465
               ALI+K+  +GQP +AET YN  ++  GI P  S+L SM+    +L
Sbjct: 97  CCCGALIRKLTEMGQPGLAETFYNQRVIGNGIVPDSSVLDSMVFCLVKL 145


>ref|XP_002312829.1| predicted protein [Populus trichocarpa] gi|222849237|gb|EEE86784.1|
           predicted protein [Populus trichocarpa]
          Length = 734

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 47/112 (41%), Positives = 68/112 (60%)
 Frame = +1

Query: 136 PSPLSEDNKALCFSLADKYLTRGLISSANGIIDRIIKRSSSVTDTISAVDFAISRGLDLN 315
           P P+S D+ +LC SL    L RGL+SSA  +I R I  S +V D +SA++FA + G+DL 
Sbjct: 30  PQPISNDHTSLCQSLVHDLLRRGLLSSAQQVIQRFIASSPTVPDALSAIEFASASGVDLG 89

Query: 316 SINIAALIQKIVTLGQPHIAETVYNHTIVSRGIAPVPSILQSMIIFYCRLGK 471
                 L++K+V LG+P  A   Y   +++RG  P  +I+ SMII   +LGK
Sbjct: 90  LGISCELLRKLVDLGEPLSAHEFYRDHVIARGTEPDSNIVNSMIICLAKLGK 141