BLASTX nr result

ID: Cimicifuga21_contig00036352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036352
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276749.1| PREDICTED: 20 kDa chaperonin, chloroplastic ...   131   7e-29
gb|AAT80889.1| chloroplast chaperonin 21 [Vitis vinifera]             131   7e-29
ref|XP_002277861.1| PREDICTED: 20 kDa chaperonin, chloroplastic ...   130   1e-28
emb|CAN72581.1| hypothetical protein VITISV_035293 [Vitis vinifera]   130   1e-28
ref|XP_003542372.1| PREDICTED: 20 kDa chaperonin, chloroplastic-...   129   3e-28

>ref|XP_002276749.1| PREDICTED: 20 kDa chaperonin, chloroplastic [Vitis vinifera]
           gi|50660327|gb|AAT80888.1| chloroplast chaperonin 21
           [Vitis vinifera] gi|297738526|emb|CBI27771.3| unnamed
           protein product [Vitis vinifera]
          Length = 251

 Score =  131 bits (329), Expect = 7e-29
 Identities = 64/76 (84%), Positives = 72/76 (94%)
 Frame = -3

Query: 267 TAGGLLLTEATKDKPSIGTVVAVGPGSLDEEGKRKTLTLSAGNTVMYSKYAGNDFKGTDG 88
           TAGGLLLTEA+K+KPSIGTVVAVGPG LDE+GKRK L++S GNTV+YSKYAGNDFKG+DG
Sbjct: 176 TAGGLLLTEASKEKPSIGTVVAVGPGPLDEDGKRKPLSVSPGNTVLYSKYAGNDFKGSDG 235

Query: 87  SDYIALRESDIMAVLS 40
           SDYIAL+ SDIMAVLS
Sbjct: 236 SDYIALKASDIMAVLS 251


>gb|AAT80889.1| chloroplast chaperonin 21 [Vitis vinifera]
          Length = 125

 Score =  131 bits (329), Expect = 7e-29
 Identities = 64/76 (84%), Positives = 72/76 (94%)
 Frame = -3

Query: 267 TAGGLLLTEATKDKPSIGTVVAVGPGSLDEEGKRKTLTLSAGNTVMYSKYAGNDFKGTDG 88
           TAGGLLLTEA+K+KPSIGTVVAVGPG LDE+GKRK L++S GNTV+YSKYAGNDFKG+DG
Sbjct: 50  TAGGLLLTEASKEKPSIGTVVAVGPGPLDEDGKRKPLSVSPGNTVLYSKYAGNDFKGSDG 109

Query: 87  SDYIALRESDIMAVLS 40
           SDYIAL+ SDIMAVLS
Sbjct: 110 SDYIALKASDIMAVLS 125


>ref|XP_002277861.1| PREDICTED: 20 kDa chaperonin, chloroplastic [Vitis vinifera]
           gi|297734211|emb|CBI15458.3| unnamed protein product
           [Vitis vinifera]
          Length = 251

 Score =  130 bits (326), Expect = 1e-28
 Identities = 63/76 (82%), Positives = 71/76 (93%)
 Frame = -3

Query: 267 TAGGLLLTEATKDKPSIGTVVAVGPGSLDEEGKRKTLTLSAGNTVMYSKYAGNDFKGTDG 88
           TAGGLLLTEATK+KPSIGTV+AVGPGSLD EG RK L+LS G+T+MYSKYAGN+FKG+DG
Sbjct: 176 TAGGLLLTEATKEKPSIGTVIAVGPGSLDGEGNRKPLSLSPGSTIMYSKYAGNEFKGSDG 235

Query: 87  SDYIALRESDIMAVLS 40
           SDYIALR SD+MAVLS
Sbjct: 236 SDYIALRASDVMAVLS 251



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
 Frame = -3

Query: 267 TAGGLLLTEATKDKPSIGTVVAVGPGSLDEEGKRKT-LTLSAGNTVMYSKYAGNDFKGTD 91
           T GG+LL    + KP  G VVAVG G     GK K  + +  G +V+YSKYAG + +  +
Sbjct: 78  TGGGILLPTTAQTKPQGGEVVAVGEGR--TVGKNKVDIGVKTGTSVVYSKYAGTELE-FN 134

Query: 90  GSDYIALRESDIMAVL 43
           GS+++ L+E DI+ +L
Sbjct: 135 GSNHLILKEDDIVGIL 150


>emb|CAN72581.1| hypothetical protein VITISV_035293 [Vitis vinifera]
          Length = 246

 Score =  130 bits (326), Expect = 1e-28
 Identities = 63/76 (82%), Positives = 71/76 (93%)
 Frame = -3

Query: 267 TAGGLLLTEATKDKPSIGTVVAVGPGSLDEEGKRKTLTLSAGNTVMYSKYAGNDFKGTDG 88
           TAGGLLLTEATK+KPSIGTV+AVGPGSLD EG RK L+LS G+T+MYSKYAGN+FKG+DG
Sbjct: 171 TAGGLLLTEATKEKPSIGTVIAVGPGSLDGEGNRKPLSLSPGSTIMYSKYAGNEFKGSDG 230

Query: 87  SDYIALRESDIMAVLS 40
           SDYIALR SD+MAVLS
Sbjct: 231 SDYIALRASDVMAVLS 246



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
 Frame = -3

Query: 267 TAGGLLLTEATKDKPSIGTVVAVGPGSLDEEGKRKT-LTLSAGNTVMYSKYAGNDFKGTD 91
           T GG+LL    + KP  G VVAVG G     GK K  + +  G +V+YSKYAG + +  +
Sbjct: 73  TGGGILLPTTAQTKPQGGEVVAVGEGR--TVGKNKVDIGVKTGTSVVYSKYAGTELE-FN 129

Query: 90  GSDYIALRESDIMAVL 43
           GS+++ L+E DI+ +L
Sbjct: 130 GSNHLILKEDDIVGIL 145


>ref|XP_003542372.1| PREDICTED: 20 kDa chaperonin, chloroplastic-like [Glycine max]
          Length = 251

 Score =  129 bits (323), Expect = 3e-28
 Identities = 62/76 (81%), Positives = 69/76 (90%)
 Frame = -3

Query: 267 TAGGLLLTEATKDKPSIGTVVAVGPGSLDEEGKRKTLTLSAGNTVMYSKYAGNDFKGTDG 88
           TAGGLLLTEATK+KPSIGTV+AVGPG LDEEG RK L++  GNTV+YSKYAGNDFKG DG
Sbjct: 176 TAGGLLLTEATKEKPSIGTVIAVGPGPLDEEGNRKPLSVVPGNTVLYSKYAGNDFKGKDG 235

Query: 87  SDYIALRESDIMAVLS 40
           SDYIALR SD+MA+LS
Sbjct: 236 SDYIALRASDVMAILS 251


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