BLASTX nr result
ID: Cimicifuga21_contig00036344
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00036344 (287 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAL78659.1|AF405557_1 reverse transcriptase [Fagus sylvatica] 116 2e-24 emb|CAN62252.1| hypothetical protein VITISV_027357 [Vitis vinifera] 113 1e-23 ref|XP_002272748.2| PREDICTED: uncharacterized protein LOC100256... 112 4e-23 emb|CAN76026.1| hypothetical protein VITISV_027817 [Vitis vinifera] 112 4e-23 emb|CAN60702.1| hypothetical protein VITISV_015869 [Vitis vinifera] 112 4e-23 >gb|AAL78659.1|AF405557_1 reverse transcriptase [Fagus sylvatica] Length = 168 Score = 116 bits (290), Expect = 2e-24 Identities = 53/87 (60%), Positives = 74/87 (85%) Frame = +2 Query: 26 FRPISLVGGIYKIISSLLAARLKMVLPKLVSEYQSAFVGGKQILDSVLIANECIDSRIRQ 205 FRPISL+G IYK+++ +LA RLK+VL ++SE Q++FVGG+QILDSVLIANEC+DSRI+ Sbjct: 1 FRPISLIGSIYKLLAKVLANRLKLVLDSVISESQNSFVGGRQILDSVLIANECLDSRIKS 60 Query: 206 CTPGVLYKVDISKAHDNVNWEYLDYVL 286 PG++ K+DI KA+D+VNW+ L ++L Sbjct: 61 GIPGLICKLDIEKAYDHVNWDCLFFIL 87 >emb|CAN62252.1| hypothetical protein VITISV_027357 [Vitis vinifera] Length = 583 Score = 113 bits (283), Expect = 1e-23 Identities = 54/94 (57%), Positives = 75/94 (79%) Frame = +2 Query: 5 GALSIKDFRPISLVGGIYKIISSLLAARLKMVLPKLVSEYQSAFVGGKQILDSVLIANEC 184 GA +KDFRPISLVG +YK+++ +LA R+K V+ K++SE+Q+AFV G+QILD+VLIANE Sbjct: 138 GAEDLKDFRPISLVGSLYKLLAKVLANRIKKVMGKVISEFQNAFVEGRQILDAVLIANEA 197 Query: 185 IDSRIRQCTPGVLYKVDISKAHDNVNWEYLDYVL 286 +DSR++ GVL K+DI KA+D V+W +L VL Sbjct: 198 VDSRLKDNVGGVLCKLDIEKAYDRVSWSFLLXVL 231 >ref|XP_002272748.2| PREDICTED: uncharacterized protein LOC100256388 [Vitis vinifera] Length = 2667 Score = 112 bits (279), Expect = 4e-23 Identities = 53/95 (55%), Positives = 74/95 (77%) Frame = +2 Query: 2 EGALSIKDFRPISLVGGIYKIISSLLAARLKMVLPKLVSEYQSAFVGGKQILDSVLIANE 181 EG +KDFRPISLVG +YK+++ +LA RLK V+ +++S+ Q AFV G+QILD+VLIANE Sbjct: 506 EGTEDLKDFRPISLVGSVYKLLAKVLANRLKTVMGEVISDSQHAFVHGRQILDAVLIANE 565 Query: 182 CIDSRIRQCTPGVLYKVDISKAHDNVNWEYLDYVL 286 +DSR++ PG+L K+DI KA D+VNW +L V+ Sbjct: 566 ALDSRLKDNIPGLLLKMDIEKAFDHVNWNFLMEVM 600 >emb|CAN76026.1| hypothetical protein VITISV_027817 [Vitis vinifera] Length = 1728 Score = 112 bits (279), Expect = 4e-23 Identities = 53/95 (55%), Positives = 74/95 (77%) Frame = +2 Query: 2 EGALSIKDFRPISLVGGIYKIISSLLAARLKMVLPKLVSEYQSAFVGGKQILDSVLIANE 181 EG +KDFRPISLVG +YK+++ +LA RLK V+ +++S+ Q AFV G+QILD+VLIANE Sbjct: 587 EGTEDLKDFRPISLVGSVYKLLAKVLANRLKTVMGEVISDSQHAFVHGRQILDAVLIANE 646 Query: 182 CIDSRIRQCTPGVLYKVDISKAHDNVNWEYLDYVL 286 +DSR++ PG+L K+DI KA D+VNW +L V+ Sbjct: 647 ALDSRLKDNIPGLLLKMDIEKAFDHVNWNFLMEVM 681 >emb|CAN60702.1| hypothetical protein VITISV_015869 [Vitis vinifera] Length = 3028 Score = 112 bits (279), Expect = 4e-23 Identities = 53/94 (56%), Positives = 76/94 (80%) Frame = +2 Query: 5 GALSIKDFRPISLVGGIYKIISSLLAARLKMVLPKLVSEYQSAFVGGKQILDSVLIANEC 184 GA ++DFRPISLVGG+YK+++ +LA RLK V+ K+VS Q+AFV G+QILD+ LIANE Sbjct: 2364 GAEDLRDFRPISLVGGLYKLLAKVLANRLKKVVGKVVSSAQNAFVEGRQILDAALIANEA 2423 Query: 185 IDSRIRQCTPGVLYKVDISKAHDNVNWEYLDYVL 286 IDS +++ GVL K+D+ KA+D++NW++L +VL Sbjct: 2424 IDSLLKRNESGVLCKLDLEKAYDHINWDFLIFVL 2457