BLASTX nr result

ID: Cimicifuga21_contig00036344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036344
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL78659.1|AF405557_1 reverse transcriptase [Fagus sylvatica]      116   2e-24
emb|CAN62252.1| hypothetical protein VITISV_027357 [Vitis vinifera]   113   1e-23
ref|XP_002272748.2| PREDICTED: uncharacterized protein LOC100256...   112   4e-23
emb|CAN76026.1| hypothetical protein VITISV_027817 [Vitis vinifera]   112   4e-23
emb|CAN60702.1| hypothetical protein VITISV_015869 [Vitis vinifera]   112   4e-23

>gb|AAL78659.1|AF405557_1 reverse transcriptase [Fagus sylvatica]
          Length = 168

 Score =  116 bits (290), Expect = 2e-24
 Identities = 53/87 (60%), Positives = 74/87 (85%)
 Frame = +2

Query: 26  FRPISLVGGIYKIISSLLAARLKMVLPKLVSEYQSAFVGGKQILDSVLIANECIDSRIRQ 205
           FRPISL+G IYK+++ +LA RLK+VL  ++SE Q++FVGG+QILDSVLIANEC+DSRI+ 
Sbjct: 1   FRPISLIGSIYKLLAKVLANRLKLVLDSVISESQNSFVGGRQILDSVLIANECLDSRIKS 60

Query: 206 CTPGVLYKVDISKAHDNVNWEYLDYVL 286
             PG++ K+DI KA+D+VNW+ L ++L
Sbjct: 61  GIPGLICKLDIEKAYDHVNWDCLFFIL 87


>emb|CAN62252.1| hypothetical protein VITISV_027357 [Vitis vinifera]
          Length = 583

 Score =  113 bits (283), Expect = 1e-23
 Identities = 54/94 (57%), Positives = 75/94 (79%)
 Frame = +2

Query: 5   GALSIKDFRPISLVGGIYKIISSLLAARLKMVLPKLVSEYQSAFVGGKQILDSVLIANEC 184
           GA  +KDFRPISLVG +YK+++ +LA R+K V+ K++SE+Q+AFV G+QILD+VLIANE 
Sbjct: 138 GAEDLKDFRPISLVGSLYKLLAKVLANRIKKVMGKVISEFQNAFVEGRQILDAVLIANEA 197

Query: 185 IDSRIRQCTPGVLYKVDISKAHDNVNWEYLDYVL 286
           +DSR++    GVL K+DI KA+D V+W +L  VL
Sbjct: 198 VDSRLKDNVGGVLCKLDIEKAYDRVSWSFLLXVL 231


>ref|XP_002272748.2| PREDICTED: uncharacterized protein LOC100256388 [Vitis vinifera]
          Length = 2667

 Score =  112 bits (279), Expect = 4e-23
 Identities = 53/95 (55%), Positives = 74/95 (77%)
 Frame = +2

Query: 2   EGALSIKDFRPISLVGGIYKIISSLLAARLKMVLPKLVSEYQSAFVGGKQILDSVLIANE 181
           EG   +KDFRPISLVG +YK+++ +LA RLK V+ +++S+ Q AFV G+QILD+VLIANE
Sbjct: 506 EGTEDLKDFRPISLVGSVYKLLAKVLANRLKTVMGEVISDSQHAFVHGRQILDAVLIANE 565

Query: 182 CIDSRIRQCTPGVLYKVDISKAHDNVNWEYLDYVL 286
            +DSR++   PG+L K+DI KA D+VNW +L  V+
Sbjct: 566 ALDSRLKDNIPGLLLKMDIEKAFDHVNWNFLMEVM 600


>emb|CAN76026.1| hypothetical protein VITISV_027817 [Vitis vinifera]
          Length = 1728

 Score =  112 bits (279), Expect = 4e-23
 Identities = 53/95 (55%), Positives = 74/95 (77%)
 Frame = +2

Query: 2   EGALSIKDFRPISLVGGIYKIISSLLAARLKMVLPKLVSEYQSAFVGGKQILDSVLIANE 181
           EG   +KDFRPISLVG +YK+++ +LA RLK V+ +++S+ Q AFV G+QILD+VLIANE
Sbjct: 587 EGTEDLKDFRPISLVGSVYKLLAKVLANRLKTVMGEVISDSQHAFVHGRQILDAVLIANE 646

Query: 182 CIDSRIRQCTPGVLYKVDISKAHDNVNWEYLDYVL 286
            +DSR++   PG+L K+DI KA D+VNW +L  V+
Sbjct: 647 ALDSRLKDNIPGLLLKMDIEKAFDHVNWNFLMEVM 681


>emb|CAN60702.1| hypothetical protein VITISV_015869 [Vitis vinifera]
          Length = 3028

 Score =  112 bits (279), Expect = 4e-23
 Identities = 53/94 (56%), Positives = 76/94 (80%)
 Frame = +2

Query: 5    GALSIKDFRPISLVGGIYKIISSLLAARLKMVLPKLVSEYQSAFVGGKQILDSVLIANEC 184
            GA  ++DFRPISLVGG+YK+++ +LA RLK V+ K+VS  Q+AFV G+QILD+ LIANE 
Sbjct: 2364 GAEDLRDFRPISLVGGLYKLLAKVLANRLKKVVGKVVSSAQNAFVEGRQILDAALIANEA 2423

Query: 185  IDSRIRQCTPGVLYKVDISKAHDNVNWEYLDYVL 286
            IDS +++   GVL K+D+ KA+D++NW++L +VL
Sbjct: 2424 IDSLLKRNESGVLCKLDLEKAYDHINWDFLIFVL 2457


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