BLASTX nr result

ID: Cimicifuga21_contig00036296 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036296
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147082.1| PREDICTED: 65-kDa microtubule-associated pro...    67   1e-09
ref|XP_002265814.2| PREDICTED: 65-kDa microtubule-associated pro...    64   2e-08
emb|CBI35061.3| unnamed protein product [Vitis vinifera]               64   2e-08
ref|XP_003541570.1| PREDICTED: 65-kDa microtubule-associated pro...    62   4e-08
gb|AFW77985.1| hypothetical protein ZEAMMB73_853631 [Zea mays]         61   8e-08

>ref|XP_004147082.1| PREDICTED: 65-kDa microtubule-associated protein 5-like [Cucumis
           sativus] gi|449516970|ref|XP_004165519.1| PREDICTED:
           65-kDa microtubule-associated protein 5-like [Cucumis
           sativus]
          Length = 563

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 44/76 (57%), Positives = 52/76 (68%), Gaps = 6/76 (7%)
 Frame = -1

Query: 389 EQLATEQEALFGSRPSPVRPGTVKKPLGQINLNSTTPGRHGSHTPLGRHG----KDRKES 222
           EQLA+EQEAL+GS+P P      KKPLGQ N    TPGR    TP GR+G    KDR+ES
Sbjct: 488 EQLASEQEALYGSKPIP------KKPLGQSNTMLGTPGRR-IGTP-GRYGFSGSKDRRES 539

Query: 221 GKV--VIPDNFVALPK 180
           G+V  +IP N+VALPK
Sbjct: 540 GRVPNIIPVNYVALPK 555


>ref|XP_002265814.2| PREDICTED: 65-kDa microtubule-associated protein 5-like [Vitis
           vinifera]
          Length = 561

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 41/80 (51%), Positives = 48/80 (60%), Gaps = 9/80 (11%)
 Frame = -1

Query: 389 EQLATEQEALFGSRPSPVRPGTVKKPLGQ---INLNSTTPGRHGSHTPLGRH----GKDR 231
           EQ ATEQEALFGS+P      T KKPLGQ    N  + TP      TP  RH    GK+R
Sbjct: 488 EQFATEQEALFGSKP------TTKKPLGQSTNANTLAGTPVGRRVSTPSSRHGVSAGKER 541

Query: 230 KESGK--VVIPDNFVALPKG 177
           ++SG+    IP N+VALPKG
Sbjct: 542 RDSGRGGTTIPPNYVALPKG 561


>emb|CBI35061.3| unnamed protein product [Vitis vinifera]
          Length = 562

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 41/80 (51%), Positives = 48/80 (60%), Gaps = 9/80 (11%)
 Frame = -1

Query: 389 EQLATEQEALFGSRPSPVRPGTVKKPLGQ---INLNSTTPGRHGSHTPLGRH----GKDR 231
           EQ ATEQEALFGS+P      T KKPLGQ    N  + TP      TP  RH    GK+R
Sbjct: 489 EQFATEQEALFGSKP------TTKKPLGQSTNANTLAGTPVGRRVSTPSSRHGVSAGKER 542

Query: 230 KESGK--VVIPDNFVALPKG 177
           ++SG+    IP N+VALPKG
Sbjct: 543 RDSGRGGTTIPPNYVALPKG 562


>ref|XP_003541570.1| PREDICTED: 65-kDa microtubule-associated protein 5-like [Glycine
           max]
          Length = 567

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 42/80 (52%), Positives = 47/80 (58%), Gaps = 10/80 (12%)
 Frame = -1

Query: 389 EQLATEQEALFGSRPSPVRPGTVKKPLGQI----NLNSTTPGRHGSHTPLGRH----GKD 234
           EQ A EQEALFGSR         KKPLGQ      +  T  GR    TP GRH    GKD
Sbjct: 486 EQHAVEQEALFGSR------SATKKPLGQSTHANTILGTPTGRRMLSTPSGRHGNSGGKD 539

Query: 233 RKESGKV--VIPDNFVALPK 180
           R+ESG+V  +IP N+VALPK
Sbjct: 540 RRESGRVNSIIPVNYVALPK 559


>gb|AFW77985.1| hypothetical protein ZEAMMB73_853631 [Zea mays]
          Length = 579

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 38/80 (47%), Positives = 47/80 (58%), Gaps = 10/80 (12%)
 Frame = -1

Query: 389 EQLATEQEALFGSRPSPVRPGTVKKPLGQ---INLNSTTPGRHGSHTPLGRHGKDRKESG 219
           EQ ATEQ A FG++PSP+RP + +KPLGQ    N+   TP      TP+ R G  R  SG
Sbjct: 494 EQFATEQGAKFGTKPSPIRPLSSRKPLGQSSNANIIGGTPTSRRVSTPMSRKG--RPSSG 551

Query: 218 KV-------VIPDNFVALPK 180
           +V       V P N+VALPK
Sbjct: 552 RVQEAVKTAVAPANYVALPK 571


Top