BLASTX nr result

ID: Cimicifuga21_contig00036255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036255
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15806.3| unnamed protein product [Vitis vinifera]               87   2e-15
ref|XP_002265847.1| PREDICTED: eukaryotic translation initiation...    87   2e-15
ref|XP_002319977.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
gb|ABK96053.1| unknown [Populus trichocarpa]                           79   3e-13
pir||T17104 translation initiation factor eIF-2 beta chain - app...    72   6e-11

>emb|CBI15806.3| unnamed protein product [Vitis vinifera]
          Length = 290

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 53/94 (56%), Positives = 69/94 (73%), Gaps = 7/94 (7%)
 Frame = +3

Query: 138 MAEDNHAVDLKDE-GEVAPFDSTKTERK--VVIQD*ADDSVDKVAEKTEIQSVSCGLENG 308
           MA++N   ++KDE  E+APFD TK ++K  VVIQD ADDSVDK+AEKTE  SVS G+EN 
Sbjct: 22  MADENQN-EVKDEVAELAPFDPTKKKKKKKVVIQDPADDSVDKLAEKTESLSVSEGVENT 80

Query: 309 VAGL---NKKPVDTDFMNTENGD-KENIDDQIGE 398
            +G+    KKPV+TD +N + GD KE++DD  GE
Sbjct: 81  FSGMKKKKKKPVETDILNDDGGDGKEDLDDHNGE 114


>ref|XP_002265847.1| PREDICTED: eukaryotic translation initiation factor 2 subunit beta
           [Vitis vinifera]
          Length = 269

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 53/94 (56%), Positives = 69/94 (73%), Gaps = 7/94 (7%)
 Frame = +3

Query: 138 MAEDNHAVDLKDE-GEVAPFDSTKTERK--VVIQD*ADDSVDKVAEKTEIQSVSCGLENG 308
           MA++N   ++KDE  E+APFD TK ++K  VVIQD ADDSVDK+AEKTE  SVS G+EN 
Sbjct: 1   MADENQN-EVKDEVAELAPFDPTKKKKKKKVVIQDPADDSVDKLAEKTESLSVSEGVENT 59

Query: 309 VAGL---NKKPVDTDFMNTENGD-KENIDDQIGE 398
            +G+    KKPV+TD +N + GD KE++DD  GE
Sbjct: 60  FSGMKKKKKKPVETDILNDDGGDGKEDLDDHNGE 93


>ref|XP_002319977.1| predicted protein [Populus trichocarpa] gi|222858353|gb|EEE95900.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 51/95 (53%), Positives = 65/95 (68%), Gaps = 8/95 (8%)
 Frame = +3

Query: 138 MAEDNHAVDLKDE-GEVAPFDSTKTERK--VVIQD*ADDSVDKVAEKTEIQSVSCGLENG 308
           MA+DN   DLKDE  E+APFD TK ++K  VVIQ+ AD+SVD +AEKTE  SVS GLE+ 
Sbjct: 1   MADDN--TDLKDEVAELAPFDPTKKKKKKKVVIQENADESVDSLAEKTESLSVSDGLESS 58

Query: 309 VAGL---NKKPVDTDFMNTENGD--KENIDDQIGE 398
             GL    KKPV+T  ++ E GD  +E++D   GE
Sbjct: 59  FTGLKKKKKKPVETSLLDEETGDAGEEDLDVHAGE 93


>gb|ABK96053.1| unknown [Populus trichocarpa]
          Length = 270

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 51/95 (53%), Positives = 65/95 (68%), Gaps = 8/95 (8%)
 Frame = +3

Query: 138 MAEDNHAVDLKDE-GEVAPFDSTKTERK--VVIQD*ADDSVDKVAEKTEIQSVSCGLENG 308
           MA+DN   DLKDE  E+APFD TK ++K  VVIQ+ AD+SVD +AEKTE  SVS GLE+ 
Sbjct: 1   MADDN--TDLKDEVAELAPFDPTKKKKKEKVVIQENADESVDSLAEKTESLSVSDGLESS 58

Query: 309 VAGL---NKKPVDTDFMNTENGD--KENIDDQIGE 398
             GL    KKPV+T  ++ E GD  +E++D   GE
Sbjct: 59  FTGLKKKKKKPVETSLLDEETGDAGEEDLDVHAGE 93


>pir||T17104 translation initiation factor eIF-2 beta chain - apple tree
           (fragment) gi|1732361|gb|AAC06384.1| translation
           initiation factor 2 beta, partial [Malus x domestica]
          Length = 307

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 45/95 (47%), Positives = 64/95 (67%), Gaps = 8/95 (8%)
 Frame = +3

Query: 138 MAEDNHAVDLKDE--GEVAPFDSTKTERK--VVIQD*ADDSVDKVAEKTEIQSVSCGLEN 305
           MA+DN   ++KDE   ++APFD TK ++K  VVIQD  DDSV K+AEK E  + S G E+
Sbjct: 37  MADDNQN-EVKDEVVADIAPFDPTKKKKKKEVVIQDTTDDSVGKLAEKAEACTASEGQES 95

Query: 306 GVAGL---NKKPVDTDFMNTENGDK-ENIDDQIGE 398
             AGL    KKP++T  +N E+GD  E+++++ GE
Sbjct: 96  TFAGLKKKKKKPIETSILNEESGDAVEDLNERTGE 130


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