BLASTX nr result

ID: Cimicifuga21_contig00036201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036201
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278254.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anem...   289   4e-76
emb|CBI22055.3| unnamed protein product [Vitis vinifera]              289   4e-76
emb|CAN76433.1| hypothetical protein VITISV_033850 [Vitis vinifera]   289   5e-76
ref|XP_002522593.1| conserved hypothetical protein [Ricinus comm...   244   1e-62
ref|XP_002308832.1| predicted protein [Populus trichocarpa] gi|2...   226   3e-57

>ref|XP_002278254.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group D2 protein-like
            [Vitis vinifera]
          Length = 1069

 Score =  289 bits (740), Expect = 4e-76
 Identities = 141/258 (54%), Positives = 187/258 (72%)
 Frame = -1

Query: 775  YKLDCLAPQTKQNPAGCLRAPFSDSKDIANEFVNKIRKLFPCLKKHFDCAVCVLNGGDET 596
            YKLD  +P +K   A  L +P   S+   ++F+ KI+ LFP  KKHF+ AV +L  G+E 
Sbjct: 678  YKLDFFSPPSKAFSARHLGSPPGLSRVTVSQFLAKIKPLFPTFKKHFNAAVSILKEGNEN 737

Query: 595  CQEHWSIESASAGNPVIPGLVVSKSAVAGSVFREVLSCLSKMLNLPDIKTNTPVLLELLK 416
            C+EHW ++SASAGNP IP LV+S+S+V  SVF E+L C + ML L DI  + P+L  LL+
Sbjct: 738  CEEHWKVQSASAGNPDIPNLVLSRSSVCTSVFNEILHCFNMMLRLADINLDKPILTGLLE 797

Query: 415  AFQPIRIPDSLFSGIQPVPSPGNIDYLYCGAYAFLEGVLDTACSSSVLMASEVLVTLESI 236
            AFQPI++ DS+FSG+QP+P PG I+YLYCGAY+F+E +LD ACS S ++ASE L+TLESI
Sbjct: 798  AFQPIKMQDSIFSGLQPIPLPGTIEYLYCGAYSFVEDILDLACSFSFMLASEALLTLESI 857

Query: 235  VNSAKLFLDKLHEGSSKSMHVGFVHKVIPSLRNRLGTCAHKLLMHNWDCENLENGWKSKG 56
            V S   F DKL EG+ +S  +G +  V+P+LR+RLGT + K+LMHNWD EN ENG K KG
Sbjct: 858  VTSILKFNDKLMEGNDRSTSMGSIEAVLPTLRSRLGTSSRKILMHNWDNENSENGVKRKG 917

Query: 55   ETIQKILHIYFENSERTA 2
            E +Q+IL IY  NSE T+
Sbjct: 918  EIVQRILQIYLGNSESTS 935


>emb|CBI22055.3| unnamed protein product [Vitis vinifera]
          Length = 1507

 Score =  289 bits (740), Expect = 4e-76
 Identities = 141/258 (54%), Positives = 187/258 (72%)
 Frame = -1

Query: 775  YKLDCLAPQTKQNPAGCLRAPFSDSKDIANEFVNKIRKLFPCLKKHFDCAVCVLNGGDET 596
            YKLD  +P +K   A  L +P   S+   ++F+ KI+ LFP  KKHF+ AV +L  G+E 
Sbjct: 1004 YKLDFFSPPSKAFSARHLGSPPGLSRVTVSQFLAKIKPLFPTFKKHFNAAVSILKEGNEN 1063

Query: 595  CQEHWSIESASAGNPVIPGLVVSKSAVAGSVFREVLSCLSKMLNLPDIKTNTPVLLELLK 416
            C+EHW ++SASAGNP IP LV+S+S+V  SVF E+L C + ML L DI  + P+L  LL+
Sbjct: 1064 CEEHWKVQSASAGNPDIPNLVLSRSSVCTSVFNEILHCFNMMLRLADINLDKPILTGLLE 1123

Query: 415  AFQPIRIPDSLFSGIQPVPSPGNIDYLYCGAYAFLEGVLDTACSSSVLMASEVLVTLESI 236
            AFQPI++ DS+FSG+QP+P PG I+YLYCGAY+F+E +LD ACS S ++ASE L+TLESI
Sbjct: 1124 AFQPIKMQDSIFSGLQPIPLPGTIEYLYCGAYSFVEDILDLACSFSFMLASEALLTLESI 1183

Query: 235  VNSAKLFLDKLHEGSSKSMHVGFVHKVIPSLRNRLGTCAHKLLMHNWDCENLENGWKSKG 56
            V S   F DKL EG+ +S  +G +  V+P+LR+RLGT + K+LMHNWD EN ENG K KG
Sbjct: 1184 VTSILKFNDKLMEGNDRSTSMGSIEAVLPTLRSRLGTSSRKILMHNWDNENSENGVKRKG 1243

Query: 55   ETIQKILHIYFENSERTA 2
            E +Q+IL IY  NSE T+
Sbjct: 1244 EIVQRILQIYLGNSESTS 1261


>emb|CAN76433.1| hypothetical protein VITISV_033850 [Vitis vinifera]
          Length = 1201

 Score =  289 bits (739), Expect = 5e-76
 Identities = 141/258 (54%), Positives = 187/258 (72%)
 Frame = -1

Query: 775  YKLDCLAPQTKQNPAGCLRAPFSDSKDIANEFVNKIRKLFPCLKKHFDCAVCVLNGGDET 596
            YKLD  +P +K   A  L +P   S+   ++F+ KI+ LFP  KKHF+ AV +L  G+E 
Sbjct: 879  YKLDFFSPPSKAFSARHLGSPPGLSRVTLSQFLAKIKPLFPTFKKHFNAAVSILKEGNEN 938

Query: 595  CQEHWSIESASAGNPVIPGLVVSKSAVAGSVFREVLSCLSKMLNLPDIKTNTPVLLELLK 416
            C+EHW ++SASAGNP IP LV+S+S+V  SVF E+L C + ML L DI  + P+L  LL+
Sbjct: 939  CEEHWKVQSASAGNPDIPNLVLSRSSVCTSVFNEILHCFNMMLRLADINLDKPILTGLLE 998

Query: 415  AFQPIRIPDSLFSGIQPVPSPGNIDYLYCGAYAFLEGVLDTACSSSVLMASEVLVTLESI 236
            AFQPI++ DS+FSG+QP+P PG I+YLYCGAY+F+E +LD ACS S ++ASE L+TLESI
Sbjct: 999  AFQPIKMQDSIFSGLQPIPLPGTIEYLYCGAYSFVEDILDLACSFSFMLASEALLTLESI 1058

Query: 235  VNSAKLFLDKLHEGSSKSMHVGFVHKVIPSLRNRLGTCAHKLLMHNWDCENLENGWKSKG 56
            V S   F DKL EG+ +S  +G +  V+P+LR+RLGT + K+LMHNWD EN ENG K KG
Sbjct: 1059 VTSILKFNDKLMEGNDRSTSMGSIEAVLPTLRSRLGTSSRKILMHNWDNENSENGVKRKG 1118

Query: 55   ETIQKILHIYFENSERTA 2
            E +Q+IL IY  NSE T+
Sbjct: 1119 EIVQRILQIYLGNSESTS 1136


>ref|XP_002522593.1| conserved hypothetical protein [Ricinus communis]
            gi|223538184|gb|EEF39794.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1188

 Score =  244 bits (624), Expect = 1e-62
 Identities = 130/255 (50%), Positives = 174/255 (68%), Gaps = 1/255 (0%)
 Frame = -1

Query: 772  KLDCLAPQTKQNPAGCLRAPFSDSKDIANEFVNKIRKLFPCLKKHFDCAVCVLNGG-DET 596
            KLD   P  K+ P+ C+      S+ I+ EF++K+  LFP L++HF+CA+ VL     +T
Sbjct: 786  KLDYFTPG-KEMPSRCMGPAPGFSRLISEEFLSKVGPLFPNLRRHFECALSVLKEVVKDT 844

Query: 595  CQEHWSIESASAGNPVIPGLVVSKSAVAGSVFREVLSCLSKMLNLPDIKTNTPVLLELLK 416
            C+EHW + SASAGNP I  LV SKS+V+ SV +E+L C  K LNLPD++    VL +LL+
Sbjct: 845  CEEHWKVHSASAGNPDIGNLVFSKSSVSISVSKEILCCFRKFLNLPDVQMEKAVLSDLLE 904

Query: 415  AFQPIRIPDSLFSGIQPVPSPGNIDYLYCGAYAFLEGVLDTACSSSVLMASEVLVTLESI 236
            AFQ  +I + + S IQP P PG I++LY GA +FLE VL+TA S S  +ASE L+TLES+
Sbjct: 905  AFQSSKISEVVLSSIQPSPLPGTIEFLYLGASSFLEDVLNTASSISFTLASESLLTLESL 964

Query: 235  VNSAKLFLDKLHEGSSKSMHVGFVHKVIPSLRNRLGTCAHKLLMHNWDCENLENGWKSKG 56
            V S  +F DK  E + KS     +H+++P+LR  LGT A KLL HNW   NLENGWK+KG
Sbjct: 965  VASLHIFFDK-SEKTGKSTGSISIHRILPTLRRSLGTSAQKLLRHNWGNGNLENGWKNKG 1023

Query: 55   ETIQKILHIYFENSE 11
            E +QK+LHIY EN+E
Sbjct: 1024 EIVQKMLHIYLENNE 1038


>ref|XP_002308832.1| predicted protein [Populus trichocarpa] gi|222854808|gb|EEE92355.1|
            predicted protein [Populus trichocarpa]
          Length = 1476

 Score =  226 bits (577), Expect = 3e-57
 Identities = 119/254 (46%), Positives = 159/254 (62%)
 Frame = -1

Query: 772  KLDCLAPQTKQNPAGCLRAPFSDSKDIANEFVNKIRKLFPCLKKHFDCAVCVLNGGDETC 593
            KLD   P  KQ  A CL AP   ++    EF++ +R LFP L++HFD A+ VL  GD TC
Sbjct: 1002 KLDYFMPPGKQFSATCLSAPAGFTRMTLQEFLSNVRPLFPNLRRHFDNAIFVLKEGDGTC 1061

Query: 592  QEHWSIESASAGNPVIPGLVVSKSAVAGSVFREVLSCLSKMLNLPDIKTNTPVLLELLKA 413
            ++HW++ SASAGNP +  +V SKS V+  VF+EVL   SKMLNL D++ +  VL +LL+A
Sbjct: 1062 EDHWNVHSASAGNPEVASIVFSKSVVSTLVFKEVLHSFSKMLNLIDVQMHKSVLSDLLEA 1121

Query: 412  FQPIRIPDSLFSGIQPVPSPGNIDYLYCGAYAFLEGVLDTACSSSVLMASEVLVTLESIV 233
            FQP  + +++FSG+Q  PSPG I+YLY GA +F+E  LD    S + +A         + 
Sbjct: 1122 FQPREVSENVFSGLQHSPSPGTIEYLYLGASSFIEDALDMGIDSILFVA---------VY 1172

Query: 232  NSAKLFLDKLHEGSSKSMHVGFVHKVIPSLRNRLGTCAHKLLMHNWDCENLENGWKSKGE 53
            N  K                    +++P+LR+RLGT A KLL HNWD E+LENGWK+KGE
Sbjct: 1173 NVVK--------------------RILPNLRSRLGTSAQKLLSHNWDSEHLENGWKNKGE 1212

Query: 52   TIQKILHIYFENSE 11
             +QKIL IY ENSE
Sbjct: 1213 IVQKILQIYLENSE 1226


Top