BLASTX nr result

ID: Cimicifuga21_contig00036200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036200
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea m...   134   1e-29
ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containi...   134   1e-29
ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containi...   133   1e-29
ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containi...   132   2e-29
emb|CBI32403.3| unnamed protein product [Vitis vinifera]              132   2e-29

>tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
          Length = 746

 Score =  134 bits (336), Expect = 1e-29
 Identities = 61/86 (70%), Positives = 71/86 (82%)
 Frame = -2

Query: 260 YSIMVDLLGRTGKLDEAMHLIDQMPIPPGSHVWGALLGACRIHGNVEMGTLASHHLFEVD 81
           Y+ MVD+LGR G+LDEA   I  MPI P S VWGALLGACRIHGNVEMG +AS +LFE+D
Sbjct: 512 YTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELD 571

Query: 80  SENVGYYVLLSNIYANVGKWEGVDKV 3
            ENVGYYVL+SN+YA +GKW+GVD V
Sbjct: 572 PENVGYYVLMSNMYAKIGKWDGVDAV 597


>ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Brachypodium distachyon]
          Length = 747

 Score =  134 bits (336), Expect = 1e-29
 Identities = 61/86 (70%), Positives = 72/86 (83%)
 Frame = -2

Query: 260 YSIMVDLLGRTGKLDEAMHLIDQMPIPPGSHVWGALLGACRIHGNVEMGTLASHHLFEVD 81
           Y+ M D+LGR G+LDEA + I  MPI P S VWGALLGACRIHGNVEMG +AS +LFE+D
Sbjct: 513 YACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELD 572

Query: 80  SENVGYYVLLSNIYANVGKWEGVDKV 3
            ENVGYYVL+SN+YA VGKW+GVD+V
Sbjct: 573 PENVGYYVLMSNMYAKVGKWDGVDEV 598


>ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  133 bits (335), Expect = 1e-29
 Identities = 63/86 (73%), Positives = 69/86 (80%)
 Frame = -2

Query: 260 YSIMVDLLGRTGKLDEAMHLIDQMPIPPGSHVWGALLGACRIHGNVEMGTLASHHLFEVD 81
           Y  MVDLLGR G L+ A   I  MP+ P + +WGALLGACRIHGN+E+G  AS  LFEVD
Sbjct: 616 YGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVD 675

Query: 80  SENVGYYVLLSNIYANVGKWEGVDKV 3
           SENVGYYVLLSNIYANVGKWEGVDKV
Sbjct: 676 SENVGYYVLLSNIYANVGKWEGVDKV 701


>ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  132 bits (333), Expect = 2e-29
 Identities = 62/86 (72%), Positives = 69/86 (80%)
 Frame = -2

Query: 260 YSIMVDLLGRTGKLDEAMHLIDQMPIPPGSHVWGALLGACRIHGNVEMGTLASHHLFEVD 81
           Y  MVDLLGR G L+ A   I  MP+ P + +WGALLGACRIHGN+E+G  AS  LFEVD
Sbjct: 659 YGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVD 718

Query: 80  SENVGYYVLLSNIYANVGKWEGVDKV 3
           S+NVGYYVLLSNIYANVGKWEGVDKV
Sbjct: 719 SKNVGYYVLLSNIYANVGKWEGVDKV 744


>emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  132 bits (333), Expect = 2e-29
 Identities = 62/86 (72%), Positives = 69/86 (80%)
 Frame = -2

Query: 260 YSIMVDLLGRTGKLDEAMHLIDQMPIPPGSHVWGALLGACRIHGNVEMGTLASHHLFEVD 81
           Y  MVDLLGR G L+ A   I  MP+ P + +WGALLGACRIHGN+E+G  AS  LFEVD
Sbjct: 426 YGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVD 485

Query: 80  SENVGYYVLLSNIYANVGKWEGVDKV 3
           S+NVGYYVLLSNIYANVGKWEGVDKV
Sbjct: 486 SKNVGYYVLLSNIYANVGKWEGVDKV 511


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