BLASTX nr result

ID: Cimicifuga21_contig00036153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036153
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277547.1| PREDICTED: ABC transporter B family member 2...   256   2e-66
gb|AAF23176.1|AF216497_1 P-glycoprotein [Gossypium hirsutum]          251   5e-65
ref|XP_002304346.1| multidrug/pheromone exporter, MDR family, AB...   251   9e-65
ref|XP_002527657.1| multidrug resistance protein 1, 2, putative ...   247   1e-63
ref|XP_003533440.1| PREDICTED: ABC transporter B family member 2...   246   2e-63

>ref|XP_002277547.1| PREDICTED: ABC transporter B family member 2 [Vitis vinifera]
           gi|297742073|emb|CBI33860.3| unnamed protein product
           [Vitis vinifera]
          Length = 1243

 Score =  256 bits (654), Expect = 2e-66
 Identities = 124/158 (78%), Positives = 145/158 (91%)
 Frame = +3

Query: 120 NEAANKQEDQDQPNKPQKVPILKLFAFADTLDYFLMGIGSLGACVHGASVPVFFIFFGKL 299
           N  + ++++ ++  KP++VP+LKLFAFAD  D FLM +GS+GAC+HGASVPVFFIFFGKL
Sbjct: 5   NPFSGQKKEGEEGKKPRRVPLLKLFAFADLYDCFLMAVGSVGACIHGASVPVFFIFFGKL 64

Query: 300 INTIGLAYLFPALASHKVAKYSIDFVYLSIVILFSSWCEVACWMYTGERQAAKMRLAYLR 479
           I+ IGLAYLFPA ASHKVAKYS+DFVYLS+VILFSSW EVACWM+TGERQAAKMR+AY+R
Sbjct: 65  IDIIGLAYLFPAAASHKVAKYSLDFVYLSLVILFSSWAEVACWMHTGERQAAKMRMAYVR 124

Query: 480 SMLNQDISLFDTEASTGEVISAITSDIIVVQDAISEKV 593
           SMLNQDISLFDTEA+TGEVISAITSDIIVVQDA+SEKV
Sbjct: 125 SMLNQDISLFDTEATTGEVISAITSDIIVVQDALSEKV 162


>gb|AAF23176.1|AF216497_1 P-glycoprotein [Gossypium hirsutum]
          Length = 1249

 Score =  251 bits (642), Expect = 5e-65
 Identities = 126/165 (76%), Positives = 145/165 (87%), Gaps = 3/165 (1%)
 Frame = +3

Query: 108 PNNDNEAANKQEDQD---QPNKPQKVPILKLFAFADTLDYFLMGIGSLGACVHGASVPVF 278
           P+  + + ++ +D D   +  K +KVP+LKLF+FAD  D+ LMG+GSLGACVHGASVPVF
Sbjct: 3   PSAGSFSGDRDDDGDATKKKKKQRKVPLLKLFSFADFYDHVLMGLGSLGACVHGASVPVF 62

Query: 279 FIFFGKLINTIGLAYLFPALASHKVAKYSIDFVYLSIVILFSSWCEVACWMYTGERQAAK 458
           FIFFGKLIN IG+AYLFP  ASHKVAKYS+DFVYLS+ ILFSSW EVACWM+TGERQAAK
Sbjct: 63  FIFFGKLINIIGMAYLFPKEASHKVAKYSLDFVYLSVAILFSSWIEVACWMHTGERQAAK 122

Query: 459 MRLAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDAISEKV 593
           MR+AYL+SMLNQDISLFDTEASTGEVISAITSDIIVVQDA+SEKV
Sbjct: 123 MRMAYLKSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKV 167


>ref|XP_002304346.1| multidrug/pheromone exporter, MDR family, ABC transporter family
           [Populus trichocarpa] gi|222841778|gb|EEE79325.1|
           multidrug/pheromone exporter, MDR family, ABC
           transporter family [Populus trichocarpa]
          Length = 1250

 Score =  251 bits (640), Expect = 9e-65
 Identities = 124/166 (74%), Positives = 144/166 (86%)
 Frame = +3

Query: 96  IGALPNNDNEAANKQEDQDQPNKPQKVPILKLFAFADTLDYFLMGIGSLGACVHGASVPV 275
           + +L  N  +  + ++ +++  K +KVP  KLFAFAD  DY LMG+GSLGACVHGASVPV
Sbjct: 1   MSSLAGNIEDTDDVEKKKEEKKKQRKVPFWKLFAFADFYDYVLMGLGSLGACVHGASVPV 60

Query: 276 FFIFFGKLINTIGLAYLFPALASHKVAKYSIDFVYLSIVILFSSWCEVACWMYTGERQAA 455
           FFIFFGKLIN IGLAYLFP  ASH+V KYS+DFVYLS+VILF+SW EVACWM+TGERQAA
Sbjct: 61  FFIFFGKLINIIGLAYLFPKEASHRVGKYSLDFVYLSVVILFASWIEVACWMHTGERQAA 120

Query: 456 KMRLAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDAISEKV 593
           KMR+AYL+SML+QDISLFDTEASTGEVI+AITSDIIVVQDAISEKV
Sbjct: 121 KMRMAYLKSMLSQDISLFDTEASTGEVIAAITSDIIVVQDAISEKV 166


>ref|XP_002527657.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
           gi|223532962|gb|EEF34728.1| multidrug resistance protein
           1, 2, putative [Ricinus communis]
          Length = 1156

 Score =  247 bits (630), Expect = 1e-63
 Identities = 122/160 (76%), Positives = 138/160 (86%)
 Frame = +3

Query: 114 NDNEAANKQEDQDQPNKPQKVPILKLFAFADTLDYFLMGIGSLGACVHGASVPVFFIFFG 293
           ND +   ++E+Q    K +KV +LKLFAFAD  DY LMG+GS+ A  HGASVPVFFIFFG
Sbjct: 16  NDEDNEQQKEEQGARKKQKKVSLLKLFAFADLYDYVLMGLGSVAAIAHGASVPVFFIFFG 75

Query: 294 KLINTIGLAYLFPALASHKVAKYSIDFVYLSIVILFSSWCEVACWMYTGERQAAKMRLAY 473
           K+IN IGLAYLFP  ASH+VAKYS+DFVYLS+ ILFSSW EVACWM+TGERQA KMR+AY
Sbjct: 76  KMINIIGLAYLFPQQASHRVAKYSLDFVYLSVAILFSSWIEVACWMHTGERQATKMRMAY 135

Query: 474 LRSMLNQDISLFDTEASTGEVISAITSDIIVVQDAISEKV 593
           LRSMLNQDISLFDTEASTGEVI+AITSDI+VVQDAISEKV
Sbjct: 136 LRSMLNQDISLFDTEASTGEVIAAITSDILVVQDAISEKV 175


>ref|XP_003533440.1| PREDICTED: ABC transporter B family member 2-like [Glycine max]
          Length = 1245

 Score =  246 bits (628), Expect = 2e-63
 Identities = 123/151 (81%), Positives = 134/151 (88%)
 Frame = +3

Query: 141 EDQDQPNKPQKVPILKLFAFADTLDYFLMGIGSLGACVHGASVPVFFIFFGKLINTIGLA 320
           +D     K  KV +LKLF+FAD  DY LMG+GS+GA VHGASVPVFFIFFGKLIN IGLA
Sbjct: 14  DDAKSNKKEHKVSLLKLFSFADFYDYVLMGVGSVGAIVHGASVPVFFIFFGKLINVIGLA 73

Query: 321 YLFPALASHKVAKYSIDFVYLSIVILFSSWCEVACWMYTGERQAAKMRLAYLRSMLNQDI 500
           YLFP  ASHKVAKYS+DFVYLSI ILFSSW EVACWM+TGERQAAKMR+AYL+SMLNQDI
Sbjct: 74  YLFPKEASHKVAKYSLDFVYLSIAILFSSWTEVACWMHTGERQAAKMRMAYLKSMLNQDI 133

Query: 501 SLFDTEASTGEVISAITSDIIVVQDAISEKV 593
           SLFDTEASTGEVISAITSDII+VQDA+SEKV
Sbjct: 134 SLFDTEASTGEVISAITSDIIIVQDALSEKV 164


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