BLASTX nr result

ID: Cimicifuga21_contig00035992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035992
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE65434.1| hypothetical protein OsJ_20795 [Oryza sativa Japo...    62   5e-08
gb|EEC80312.1| hypothetical protein OsI_22353 [Oryza sativa Indi...    62   5e-08
gb|AAC26234.1| contains similarity to maize transposon MuDR (GB:...    59   5e-07
ref|XP_002457684.1| hypothetical protein SORBIDRAFT_03g011625 [S...    56   3e-06

>gb|EEE65434.1| hypothetical protein OsJ_20795 [Oryza sativa Japonica Group]
          Length = 914

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/109 (31%), Positives = 50/109 (45%)
 Frame = -1

Query: 384  NEFVSTWYHAYTTKTAYEKYIQVINGPDMWPQTDYEVIHXXXXXXXXXXXXXXXXREMHE 205
            +++++  Y     ++ Y+ Y+Q + G   WPQ D E ++                REMHE
Sbjct: 709  DDYIAECYSVEAFRSTYDHYLQPLEGMSAWPQDDREPLNAPGYIKMPDWPKTARRREMHE 768

Query: 204  DQGGTKKILTRKGKTVRCKNCGQPGHNKRSCRNAPVAPAGPSSVTREKT 58
                TK  ++R G  +RC  C Q GHNK SC       AG SS    +T
Sbjct: 769  PPKPTK--MSRFGSVMRCTRCHQVGHNKSSCAKNNAPAAGTSSAQPMET 815


>gb|EEC80312.1| hypothetical protein OsI_22353 [Oryza sativa Indica Group]
          Length = 725

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/109 (31%), Positives = 50/109 (45%)
 Frame = -1

Query: 384 NEFVSTWYHAYTTKTAYEKYIQVINGPDMWPQTDYEVIHXXXXXXXXXXXXXXXXREMHE 205
           +++++  Y     ++ Y+ Y+Q + G   WPQ D E ++                REMHE
Sbjct: 520 DDYIAECYSVEAFRSTYDHYLQPLEGMSAWPQDDREPLNAPGYIKMPDWPKTARRREMHE 579

Query: 204 DQGGTKKILTRKGKTVRCKNCGQPGHNKRSCRNAPVAPAGPSSVTREKT 58
               TK  ++R G  +RC  C Q GHNK SC       AG SS    +T
Sbjct: 580 PPKPTK--MSRFGSVMRCTRCHQVGHNKSSCAKNNAPAAGTSSAQPMET 626


>gb|AAC26234.1| contains similarity to maize transposon MuDR (GB:M76978) [Arabidopsis
            thaliana]
          Length = 940

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/112 (31%), Positives = 46/112 (41%)
 Frame = -1

Query: 417  IRVINHLNLDPNEFVSTWYHAYTTKTAYEKYIQVINGPDMWPQTDYEVIHXXXXXXXXXX 238
            I VI   N DP ++V         K  Y+  I+ +NG  +W +     I           
Sbjct: 709  IYVITEHNRDPEDYVDRLLETQVWKATYKDNIEPMNGERLWKRRGKGRIEVPDKRGKRGR 768

Query: 237  XXXXXXREMHEDQGGTKKILTRKGKTVRCKNCGQPGHNKRSCRNAPVAPAGP 82
                   +   +       LTR+GKTV C NC Q GHNK SC+N  V  A P
Sbjct: 769  PKKFARIKEPGESSTNPTKLTREGKTVTCSNCKQIGHNKGSCKNPTVQLAPP 820


>ref|XP_002457684.1| hypothetical protein SORBIDRAFT_03g011625 [Sorghum bicolor]
           gi|241929659|gb|EES02804.1| hypothetical protein
           SORBIDRAFT_03g011625 [Sorghum bicolor]
          Length = 654

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 36/120 (30%), Positives = 50/120 (41%)
 Frame = -1

Query: 384 NEFVSTWYHAYTTKTAYEKYIQVINGPDMWPQTDYEVIHXXXXXXXXXXXXXXXXREMHE 205
           +++++  Y  +  K  Y   +Q I GPD WP  +                     RE  E
Sbjct: 525 DDYIAPCYTIHAYKKTYAHVLQPIEGPDNWPIANMPRPEPRAFVKKPGRPKTERRREQGE 584

Query: 204 DQGGTKKILTRKGKTVRCKNCGQPGHNKRSCRNAPVAPAGPSSVTREKTTGGRKRKEPST 25
           +  GTK  L+R G  +RC+ CG  GHN R C   P A    ++  R   T  RK  E  T
Sbjct: 585 EPKGTK--LSRVGIKMRCRICGTTGHNSRRCPQNPEAGNKGNAHIRRARTEKRKNAEAGT 642


Top