BLASTX nr result

ID: Cimicifuga21_contig00035944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035944
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637626.1| Pentatricopeptide repeat-containing protein ...    56   3e-06
ref|XP_003637381.1| Pentatricopeptide repeat-containing protein ...    56   3e-06

>ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355503561|gb|AES84764.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 989

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/63 (49%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
 Frame = +2

Query: 65  PTSLNKG-SNLEHKPQLKIPPLKAHLYASLFCTLIQAYLNCSRFSDAIEAFFSMRNHGLN 241
           PT + +  S+  HK  + IPP K HLY S FCTLI+ YL   RFS A   F  MR  GL 
Sbjct: 32  PTPITRTFSSQIHKDSIFIPPTKTHLYVSFFCTLIRLYLTHDRFSTASATFSHMRALGLV 91

Query: 242 PNL 250
           P L
Sbjct: 92  PTL 94


>ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355503316|gb|AES84519.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/63 (49%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
 Frame = +2

Query: 65  PTSLNKG-SNLEHKPQLKIPPLKAHLYASLFCTLIQAYLNCSRFSDAIEAFFSMRNHGLN 241
           PT + +  S+  HK  + IPP K HLY S FCTLI+ YL   RFS A   F  MR  GL 
Sbjct: 32  PTPITRTFSSQIHKDSIFIPPTKTHLYVSFFCTLIRLYLTHDRFSTASATFSHMRALGLV 91

Query: 242 PNL 250
           P L
Sbjct: 92  PTL 94


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