BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035889
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36309.3| unnamed protein product [Vitis vinifera]              132   3e-29
ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III s...   132   3e-29
emb|CBI33284.3| unnamed protein product [Vitis vinifera]              129   3e-28
ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s...   129   3e-28
ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III s...   129   3e-28

>emb|CBI36309.3| unnamed protein product [Vitis vinifera]
          Length = 493

 Score =  132 bits (332), Expect = 3e-29
 Identities = 63/121 (52%), Positives = 87/121 (71%), Gaps = 13/121 (10%)
 Frame = -3

Query: 326 GAWYVDGQFDIEFITQLKNACKKIISGQKLATVQSVSEAISKSGLSNVECTTKQIGEILR 147
           GAWYV+G  D E+I  LK  C K++S  K+AT + +SE+I+K+GL   EC+T+QI EILR
Sbjct: 189 GAWYVEGNLDTEYIKILKETCVKVLSKLKVATAEGISESINKTGLCATECSTQQIAEILR 248

Query: 146 SLVFENEIL--------EFTNV-VGTLCYKCVNKGAV----PKVGAMASIPCGVCPRINE 6
           +LV +NEI+        EF+++ +G +CY+C NKG +    PK+GAMASIPCGVCPRI +
Sbjct: 249 ALVLDNEIMEVRSSGSGEFSSIPIGAVCYRCTNKGGLGGGGPKIGAMASIPCGVCPRITQ 308

Query: 5   C 3
           C
Sbjct: 309 C 309


>ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  132 bits (332), Expect = 3e-29
 Identities = 63/121 (52%), Positives = 87/121 (71%), Gaps = 13/121 (10%)
 Frame = -3

Query: 326 GAWYVDGQFDIEFITQLKNACKKIISGQKLATVQSVSEAISKSGLSNVECTTKQIGEILR 147
           GAWYV+G  D E+I  LK  C K++S  K+AT + +SE+I+K+GL   EC+T+QI EILR
Sbjct: 99  GAWYVEGNLDTEYIKILKETCVKVLSKLKVATAEGISESINKTGLCATECSTQQIAEILR 158

Query: 146 SLVFENEIL--------EFTNV-VGTLCYKCVNKGAV----PKVGAMASIPCGVCPRINE 6
           +LV +NEI+        EF+++ +G +CY+C NKG +    PK+GAMASIPCGVCPRI +
Sbjct: 159 ALVLDNEIMEVRSSGSGEFSSIPIGAVCYRCTNKGGLGGGGPKIGAMASIPCGVCPRITQ 218

Query: 5   C 3
           C
Sbjct: 219 C 219


>emb|CBI33284.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score =  129 bits (323), Expect = 3e-28
 Identities = 61/121 (50%), Positives = 86/121 (71%), Gaps = 13/121 (10%)
 Frame = -3

Query: 326 GAWYVDGQFDIEFITQLKNACKKIISGQKLATVQSVSEAISKSGLSNVECTTKQIGEILR 147
           GAWYV+G  D E+I  LK  C +++S  K+AT + +SE+I+K+GL   EC+T+QI EILR
Sbjct: 160 GAWYVEGNLDTEYIKILKKTCVRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILR 219

Query: 146 SLVFENEIL--------EFTNV-VGTLCYKCVNKGAV----PKVGAMASIPCGVCPRINE 6
           +LV +NEI+        EF+++ +G +CY+C NKG +    P +GAMASIPCGVCPRI +
Sbjct: 220 ALVLDNEIMEVRSSGSGEFSSIPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQ 279

Query: 5   C 3
           C
Sbjct: 280 C 280


>ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  129 bits (323), Expect = 3e-28
 Identities = 61/121 (50%), Positives = 86/121 (71%), Gaps = 13/121 (10%)
 Frame = -3

Query: 326 GAWYVDGQFDIEFITQLKNACKKIISGQKLATVQSVSEAISKSGLSNVECTTKQIGEILR 147
           GAWYV+G  D E+I  LK  C +++S  K+AT + +SE+I+K+GL   EC+T+QI EILR
Sbjct: 99  GAWYVEGNLDTEYIKILKETCVRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILR 158

Query: 146 SLVFENEIL--------EFTNV-VGTLCYKCVNKGAV----PKVGAMASIPCGVCPRINE 6
           +LV +NEI+        EF+++ +G +CY+C NKG +    P +GAMASIPCGVCPRI +
Sbjct: 159 ALVLDNEIMEVRSSGSGEFSSIPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQ 218

Query: 5   C 3
           C
Sbjct: 219 C 219


>ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  129 bits (323), Expect = 3e-28
 Identities = 61/121 (50%), Positives = 86/121 (71%), Gaps = 13/121 (10%)
 Frame = -3

Query: 326 GAWYVDGQFDIEFITQLKNACKKIISGQKLATVQSVSEAISKSGLSNVECTTKQIGEILR 147
           GAWYV+G  D E+I  LK  C +++S  K+AT + +SE+I+K+GL   EC+T+QI EILR
Sbjct: 99  GAWYVEGNLDTEYIKILKKTCVRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILR 158

Query: 146 SLVFENEIL--------EFTNV-VGTLCYKCVNKGAV----PKVGAMASIPCGVCPRINE 6
           +LV +NEI+        EF+++ +G +CY+C NKG +    P +GAMASIPCGVCPRI +
Sbjct: 159 ALVLDNEIMEVRSSGSGEFSSIPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQ 218

Query: 5   C 3
           C
Sbjct: 219 C 219