BLASTX nr result

ID: Cimicifuga21_contig00035882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035882
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]    64   1e-08
emb|CAN69719.1| hypothetical protein VITISV_026312 [Vitis vinifera]    62   4e-08
ref|XP_002282564.1| PREDICTED: UPF0481 protein At3g47200 [Vitis ...    61   1e-07
ref|XP_002303847.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_002282552.2| PREDICTED: UPF0481 protein At3g47200-like [V...    58   7e-07

>emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]
          Length = 439

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 38/82 (46%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
 Frame = +1

Query: 1   GVTFKKGSPTCSFLDITFXXXXXXXXXXXXQDQTDSLLRNLIASEQCCNGRST--YMTSY 174
           GV F+ G+ +C  ++I F            +D TDSLL NLIA EQCCN R T  Y+T Y
Sbjct: 266 GVKFRMGTVSC-LMEIKFINGVLEIPPLTIEDTTDSLLGNLIAFEQCCN-RFTPHYITDY 323

Query: 175 AFLMDSLINSADDVGILRQHGI 240
             LM+ LINS  DV +L ++GI
Sbjct: 324 VILMEYLINSPKDVALLSRYGI 345


>emb|CAN69719.1| hypothetical protein VITISV_026312 [Vitis vinifera]
          Length = 467

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/80 (43%), Positives = 43/80 (53%)
 Frame = +1

Query: 1   GVTFKKGSPTCSFLDITFXXXXXXXXXXXXQDQTDSLLRNLIASEQCCNGRSTYMTSYAF 180
           GV+FK GS     LDIT+            +D  +SL RNLIA EQC   +  Y+T Y  
Sbjct: 300 GVSFKLGSENKRLLDITYGSGVLKIPKLSLEDVCESLFRNLIAFEQCHYRKRRYITDYIS 359

Query: 181 LMDSLINSADDVGILRQHGI 240
           LMD LIN+  DV +L   GI
Sbjct: 360 LMDQLINTTKDVDVLVNGGI 379


>ref|XP_002282564.1| PREDICTED: UPF0481 protein At3g47200 [Vitis vinifera]
          Length = 440

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/80 (42%), Positives = 42/80 (52%)
 Frame = +1

Query: 1   GVTFKKGSPTCSFLDITFXXXXXXXXXXXXQDQTDSLLRNLIASEQCCNGRSTYMTSYAF 180
           GV+F+ GS     LDI +             D  +SL RN+IA EQC     TY+T Y +
Sbjct: 272 GVSFELGSKEKPLLDIEYRDGVLEIPKLILADACESLFRNIIAFEQCHYREDTYITDYIY 331

Query: 181 LMDSLINSADDVGILRQHGI 240
           LMD LIN+  DV IL   GI
Sbjct: 332 LMDHLINTTKDVDILVNKGI 351


>ref|XP_002303847.1| predicted protein [Populus trichocarpa] gi|222841279|gb|EEE78826.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/81 (41%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
 Frame = +1

Query: 1   GVTFKKGSPTCSFLDITFXXXXXXXXXXXX-QDQTDSLLRNLIASEQCCNGRSTYMTSYA 177
           G+ FKK   +    D+ F              D T+SL RNL+A EQC   +  Y+T Y 
Sbjct: 247 GIKFKKREGSRRLFDVDFSENGTIEIPCLRIYDTTESLFRNLVAYEQCSQRKHLYVTDYI 306

Query: 178 FLMDSLINSADDVGILRQHGI 240
            LMD LINS +DV ILR  GI
Sbjct: 307 RLMDCLINSQEDVQILRHSGI 327


>ref|XP_002282552.2| PREDICTED: UPF0481 protein At3g47200-like [Vitis vinifera]
          Length = 440

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
 Frame = +1

Query: 1   GVTFKKGSP---TCSFLDITFXXXXXXXXXXXXQDQTDSLLRNLIASEQCCNGRSTYMTS 171
           GV FK GS        LD+ +            Q++ +SL RNLIA E+C +   TY+T 
Sbjct: 269 GVRFKLGSKDKDNDKLLDLDYNNGVLKIPHLILQEKCESLFRNLIAYEECHDHAQTYITD 328

Query: 172 YAFLMDSLINSADDVGILRQHGI 240
           Y +LMD LIN+  DV +L + GI
Sbjct: 329 YMYLMDHLINTTKDVNLLVRKGI 351


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