BLASTX nr result
ID: Cimicifuga21_contig00035873
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00035873 (581 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004159095.1| PREDICTED: LOW QUALITY PROTEIN: general tran... 59 5e-07 ref|XP_004142476.1| PREDICTED: general transcription factor 3C p... 59 5e-07 emb|CBI24753.3| unnamed protein product [Vitis vinifera] 59 6e-07 ref|XP_002323927.1| predicted protein [Populus trichocarpa] gi|2... 58 1e-06 ref|XP_002275875.1| PREDICTED: transcription factor tau subunit ... 55 9e-06 >ref|XP_004159095.1| PREDICTED: LOW QUALITY PROTEIN: general transcription factor 3C polypeptide 5-like [Cucumis sativus] Length = 592 Score = 59.3 bits (142), Expect = 5e-07 Identities = 28/61 (45%), Positives = 38/61 (62%) Frame = +1 Query: 127 YQVDADDGDFPLHPFSYPVGENISKNYLQELFGSFPPTEAGGNNKDQDAECSDGEYQIFE 306 + + DD +F LH SY E++S+ +LQELFGSFP + G D + SD EYQI+E Sbjct: 521 FNMVGDDDEFSLHSHSYLGMEDVSRTHLQELFGSFPSLDEDGEKMMDDGDGSDEEYQIYE 580 Query: 307 Q 309 Q Sbjct: 581 Q 581 >ref|XP_004142476.1| PREDICTED: general transcription factor 3C polypeptide 5-like [Cucumis sativus] Length = 556 Score = 59.3 bits (142), Expect = 5e-07 Identities = 28/61 (45%), Positives = 38/61 (62%) Frame = +1 Query: 127 YQVDADDGDFPLHPFSYPVGENISKNYLQELFGSFPPTEAGGNNKDQDAECSDGEYQIFE 306 + + DD +F LH SY E++S+ +LQELFGSFP + G D + SD EYQI+E Sbjct: 485 FNMVGDDDEFSLHSHSYLGMEDVSRTHLQELFGSFPSLDEDGEKMMDDGDGSDEEYQIYE 544 Query: 307 Q 309 Q Sbjct: 545 Q 545 >emb|CBI24753.3| unnamed protein product [Vitis vinifera] Length = 597 Score = 58.9 bits (141), Expect = 6e-07 Identities = 32/56 (57%), Positives = 40/56 (71%) Frame = +1 Query: 142 DDGDFPLHPFSYPVGENISKNYLQELFGSFPPTEAGGNNKDQDAECSDGEYQIFEQ 309 +D + L SY ENIS++YLQ LFGSF T+AGG + QDA+ SDGEYQI+EQ Sbjct: 531 EDDEDSLQSRSYLDAENISRDYLQGLFGSFSFTKAGG-GEVQDADTSDGEYQIYEQ 585 >ref|XP_002323927.1| predicted protein [Populus trichocarpa] gi|222866929|gb|EEF04060.1| predicted protein [Populus trichocarpa] Length = 527 Score = 57.8 bits (138), Expect = 1e-06 Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 2/62 (3%) Frame = +1 Query: 130 QVDADDGD--FPLHPFSYPVGENISKNYLQELFGSFPPTEAGGNNKDQDAECSDGEYQIF 303 ++D+DDG+ F ++ EN S +YLQ+L GSFP + G+ K E SDGEYQI+ Sbjct: 454 ELDSDDGEEEFDVYGMDSADMENTSTSYLQQLLGSFPSMDTNGDKKQDGGESSDGEYQIY 513 Query: 304 EQ 309 EQ Sbjct: 514 EQ 515 >ref|XP_002275875.1| PREDICTED: transcription factor tau subunit sfc1-like [Vitis vinifera] Length = 568 Score = 55.1 bits (131), Expect = 9e-06 Identities = 28/41 (68%), Positives = 34/41 (82%) Frame = +1 Query: 187 ENISKNYLQELFGSFPPTEAGGNNKDQDAECSDGEYQIFEQ 309 ENIS++YLQ LFGSF T+AGG + QDA+ SDGEYQI+EQ Sbjct: 517 ENISRDYLQGLFGSFSFTKAGG-GEVQDADTSDGEYQIYEQ 556