BLASTX nr result

ID: Cimicifuga21_contig00035835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035835
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77680.1| hypothetical protein VITISV_040762 [Vitis vinifera]    73   3e-11
emb|CAN64509.1| hypothetical protein VITISV_041217 [Vitis vinifera]    72   4e-11
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]      70   2e-10
emb|CCH50966.1| T4.5 [Malus x robusta]                                 69   4e-10
emb|CAN64418.1| hypothetical protein VITISV_030041 [Vitis vinifera]    68   9e-10

>emb|CAN77680.1| hypothetical protein VITISV_040762 [Vitis vinifera]
          Length = 590

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/83 (40%), Positives = 53/83 (63%)
 Frame = -3

Query: 278 KILYQGLTKDGLYPLSFSTQSSPPTALMGVAVSSSIWHQRLGHPSLSTLDKLLRHYKLPT 99
           +IL QG  ++G+YP+  S+ ++ P A +    S + WHQRLGHPS   + +L+  + LPT
Sbjct: 396 EILLQGPCENGVYPMP-SSPAATPIAFVHERTSVTGWHQRLGHPSFKVVTRLISSFSLPT 454

Query: 98  TSKSGGLNFCNNCQLGKSHKLSF 30
           TS   G N C++C + K+H+L F
Sbjct: 455 TSCLSGSNNCHSCSINKAHQLPF 477


>emb|CAN64509.1| hypothetical protein VITISV_041217 [Vitis vinifera]
          Length = 1269

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 42/89 (47%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
 Frame = -3

Query: 269 YQGLTKDGLY--PLSFSTQSSPPTALMGVAVSSSIWHQRLGHPSLSTLDKLLRHYKLPTT 96
           + G TKDG+Y  PLS +TQS P  A   V  + S WH RLGHPSLS    ++  + L   
Sbjct: 414 FHGRTKDGVYEWPLS-TTQSRPLIAFSSVKTTLSEWHHRLGHPSLSIFKNIMSSFHL-DV 471

Query: 95  SKSGGLNF-CNNCQLGKSHKLSFDFSKIS 12
           S+    NF CN+CQ  KSHKL F  S +S
Sbjct: 472 SRPSNFNFNCNSCQCNKSHKLPFSTSTLS 500


>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1210

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/81 (45%), Positives = 47/81 (58%)
 Frame = -3

Query: 272 LYQGLTKDGLYPLSFSTQSSPPTALMGVAVSSSIWHQRLGHPSLSTLDKLLRHYKLPTTS 93
           L +G   +GLYPL  ST SS    L  +  + SIWH RLGHPS   + K++ H  LP   
Sbjct: 416 LLRGPCCNGLYPLPASTSSSKQV-LGAIKPTVSIWHSRLGHPSWQIVQKVVSHNNLPCLG 474

Query: 92  KSGGLNFCNNCQLGKSHKLSF 30
           +S  L  C+ CQ GKSH+L F
Sbjct: 475 ESKELGVCDACQKGKSHQLPF 495


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
 Frame = -3

Query: 278 KILYQGLTKDGLYPLSFSTQSS------PPTALMGVAVSSSIWHQRLGHPSLSTLDKLLR 117
           K+L+QG ++ GLYP  ++  +        PTALM        WH+RLGHPS  TL  ++ 
Sbjct: 690 KMLFQGPSEGGLYPFYWNASNGVSGIAISPTALMIAKADIHTWHRRLGHPSGGTLHSVVH 749

Query: 116 HYKLPTTSKSGGLNFCNNCQLGKSHKLSF 30
              LP       ++ C  CQLGKS++LSF
Sbjct: 750 KNHLPVIGYVNNMSVCTACQLGKSYRLSF 778


>emb|CAN64418.1| hypothetical protein VITISV_030041 [Vitis vinifera]
          Length = 1429

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/83 (39%), Positives = 51/83 (61%)
 Frame = -3

Query: 278 KILYQGLTKDGLYPLSFSTQSSPPTALMGVAVSSSIWHQRLGHPSLSTLDKLLRHYKLPT 99
           +IL QG  ++G+YPL+ S+ ++ P A +    S+  WH RLGH S   + +L+  + LPT
Sbjct: 288 EILLQGPCENGVYPLA-SSPAATPIAFVHERTSAXGWHXRLGHRSFKVVXRLISSFSLPT 346

Query: 98  TSKSGGLNFCNNCQLGKSHKLSF 30
           TS   G N C++C   K+H+L F
Sbjct: 347 TSCLSGSNNCHSCSXNKAHQLPF 369


Top