BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035812
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat...   168   5e-40
emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]   168   5e-40
ref|XP_002534039.1| pentatricopeptide repeat-containing protein,...   167   6e-40
ref|XP_004142304.1| PREDICTED: putative pentatricopeptide repeat...   159   2e-37
ref|XP_003555199.1| PREDICTED: putative pentatricopeptide repeat...   154   7e-36

>ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g08310, mitochondrial [Vitis vinifera]
            gi|296085293|emb|CBI29025.3| unnamed protein product
            [Vitis vinifera]
          Length = 854

 Score =  168 bits (425), Expect = 5e-40
 Identities = 82/117 (70%), Positives = 95/117 (81%)
 Frame = -3

Query: 366  GEEREPTIVTYTTLIDGLCSAGRPDDAIMLWNEMMEKRCTPNRISYMALIHGLCKCSRSH 187
            G+EREP ++TYTTLIDGLC+AGRPDDAI LWNEM  K C+PNRIS++ALIHGLCKC    
Sbjct: 695  GKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWPD 754

Query: 186  VAQIYFNEMKEKEMGPDTYVYVALISGFISSGDLLLAFEILKEMVRKEEFPDPLDKN 16
             A +YF EM E+E  PDT VYVALI+ FIS+ +  LAFEILKEMV K +FPDPLDKN
Sbjct: 755  AALLYFREMGERET-PDTIVYVALITSFISNKNPTLAFEILKEMVAKGKFPDPLDKN 810



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/107 (33%), Positives = 53/107 (49%)
 Frame = -3

Query: 351 PTIVTYTTLIDGLCSAGRPDDAIMLWNEMMEKRCTPNRISYMALIHGLCKCSRSHVAQIY 172
           P IV Y+  IDG       D A+ ++ ++  +   P+ ++Y  LI+G CK  R   A   
Sbjct: 595 PDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDI 654

Query: 171 FNEMKEKEMGPDTYVYVALISGFISSGDLLLAFEILKEMVRKEEFPD 31
            +EM  K + P    Y  LI G+  +GD+  AF  L  MV KE  P+
Sbjct: 655 LDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPN 701


>emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
          Length = 814

 Score =  168 bits (425), Expect = 5e-40
 Identities = 82/117 (70%), Positives = 95/117 (81%)
 Frame = -3

Query: 366  GEEREPTIVTYTTLIDGLCSAGRPDDAIMLWNEMMEKRCTPNRISYMALIHGLCKCSRSH 187
            G+EREP ++TYTTLIDGLC+AGRPDDAI LWNEM  K C+PNRIS++ALIHGLCKC    
Sbjct: 655  GKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWPD 714

Query: 186  VAQIYFNEMKEKEMGPDTYVYVALISGFISSGDLLLAFEILKEMVRKEEFPDPLDKN 16
             A +YF EM E+E  PDT VYVALI+ FIS+ +  LAFEILKEMV K +FPDPLDKN
Sbjct: 715  AALLYFREMGERET-PDTIVYVALITSFISNKNPTLAFEILKEMVAKGKFPDPLDKN 770



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/107 (33%), Positives = 53/107 (49%)
 Frame = -3

Query: 351 PTIVTYTTLIDGLCSAGRPDDAIMLWNEMMEKRCTPNRISYMALIHGLCKCSRSHVAQIY 172
           P IV Y+  IDG       D A+ ++ ++  +   P+ ++Y  LI+G CK  R   A   
Sbjct: 555 PDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDI 614

Query: 171 FNEMKEKEMGPDTYVYVALISGFISSGDLLLAFEILKEMVRKEEFPD 31
            +EM  K + P    Y  LI G+  +GD+  AF  L  MV KE  P+
Sbjct: 615 LDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPN 661


>ref|XP_002534039.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223525946|gb|EEF28343.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 634

 Score =  167 bits (424), Expect = 6e-40
 Identities = 72/116 (62%), Positives = 93/116 (80%)
 Frame = -3

Query: 363 EEREPTIVTYTTLIDGLCSAGRPDDAIMLWNEMMEKRCTPNRISYMALIHGLCKCSRSHV 184
           +EREP + TYTTLIDGLC AGRPDDA+MLWNEM  + C PNR+++M  IHGLCKC +   
Sbjct: 470 KEREPNVFTYTTLIDGLCKAGRPDDAVMLWNEMRRRGCRPNRVAFMGFIHGLCKCDKPEA 529

Query: 183 AQIYFNEMKEKEMGPDTYVYVALISGFISSGDLLLAFEILKEMVRKEEFPDPLDKN 16
           A I+F+EM+E+EM PDTYVY++L+S F++  +  +AFEILK+MV +  FPDPLDKN
Sbjct: 530 ALIHFHEMEEEEMEPDTYVYISLVSAFVNISNFPMAFEILKKMVDRRNFPDPLDKN 585



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 34/107 (31%), Positives = 53/107 (49%)
 Frame = -3

Query: 351 PTIVTYTTLIDGLCSAGRPDDAIMLWNEMMEKRCTPNRISYMALIHGLCKCSRSHVAQIY 172
           P I+ Y+ L+ GL      D A+ L+ ++  +   P+ I+Y  L+ GL +  R+  A+  
Sbjct: 369 PNIIAYSALLGGLIEVQEVDQALKLFKDISARGRCPDVIAYNILMKGLYEAHRTEEARNL 428

Query: 171 FNEMKEKEMGPDTYVYVALISGFISSGDLLLAFEILKEMVRKEEFPD 31
           FNEM  K + P    Y  LI G+  +G +  A   L  M  KE  P+
Sbjct: 429 FNEMVMKGLIPSVVTYNLLIDGWCKNGCIDDAMNCLCSMSAKEREPN 475


>ref|XP_004142304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g08310, mitochondrial-like [Cucumis sativus]
            gi|449510601|ref|XP_004163711.1| PREDICTED: putative
            pentatricopeptide repeat-containing protein At5g08310,
            mitochondrial-like [Cucumis sativus]
          Length = 849

 Score =  159 bits (402), Expect = 2e-37
 Identities = 70/117 (59%), Positives = 91/117 (77%)
 Frame = -3

Query: 363  EEREPTIVTYTTLIDGLCSAGRPDDAIMLWNEMMEKRCTPNRISYMALIHGLCKCSRSHV 184
            E ++PTI++YTTLI+G C++GRPDDA +LWNEM EK C+PNRI+YMA++HGLCKC +   
Sbjct: 694  ENKKPTIISYTTLINGCCNSGRPDDAKILWNEMQEKGCSPNRITYMAIVHGLCKCGKPDE 753

Query: 183  AQIYFNEMKEKEMGPDTYVYVALISGFISSGDLLLAFEILKEMVRKEEFPDPLDKNY 13
            A +Y++ M+EKEM PD+YV VALI  FIS  +  +AF ILKE + K   PDP DKNY
Sbjct: 754  ALVYYHSMEEKEMKPDSYVSVALIDAFISKHNFSMAFNILKETIEKGNIPDPTDKNY 810



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 34/117 (29%), Positives = 60/117 (51%)
 Frame = -3

Query: 351 PTIVTYTTLIDGLCSAGRPDDAIMLWNEMMEKRCTPNRISYMALIHGLCKCSRSHVAQIY 172
           P IV+Y+  +DGL    + D A+ L+ ++  + C P+ +S+  LI G CK  + + A  +
Sbjct: 593 PDIVSYSAAMDGLVKINKLDRALELFQDICTRGCRPDVVSHNILIKGYCKAGKVNEAYNF 652

Query: 171 FNEMKEKEMGPDTYVYVALISGFISSGDLLLAFEILKEMVRKEEFPDPLDKNYPIMI 1
            ++M+   + P    Y  LI+ +  +GD+  A   L +M   EE   P   +Y  +I
Sbjct: 653 LHKMRVAGLVPSAVSYNLLINEWCKNGDIDKAILCLSQM--NEENKKPTIISYTTLI 707


>ref|XP_003555199.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g08310, mitochondrial-like [Glycine max]
          Length = 942

 Score =  154 bits (389), Expect = 7e-36
 Identities = 69/122 (56%), Positives = 92/122 (75%)
 Frame = -3

Query: 366  GEEREPTIVTYTTLIDGLCSAGRPDDAIMLWNEMMEKRCTPNRISYMALIHGLCKCSRSH 187
            GE+REP ++TY+TL+DG C A RPDDA+++WNEM  K C PN+I++MALI+GLCKC R  
Sbjct: 670  GEDREPNVITYSTLVDGFCRAERPDDALLVWNEMERKGCFPNQIAFMALIYGLCKCCRPT 729

Query: 186  VAQIYFNEMKEKEMGPDTYVYVALISGFISSGDLLLAFEILKEMVRKEEFPDPLDKNYPI 7
             A  Y  EM++K+M PD+++Y+ALIS F+S  DL  AFEI KEMV    FP+  DKNY I
Sbjct: 730  TALHYLREMEQKDMKPDSFIYIALISSFLSDMDLASAFEIFKEMVYSGYFPESHDKNYSI 789

Query: 6    MI 1
            ++
Sbjct: 790  VM 791