BLASTX nr result

ID: Cimicifuga21_contig00035801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035801
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30307.3| unnamed protein product [Vitis vinifera]              134   4e-30
ref|XP_002276489.1| PREDICTED: ABC transporter B family member 2...   134   4e-30
ref|XP_004149200.1| PREDICTED: ABC transporter B family member 2...   129   2e-28
ref|XP_002530326.1| abc transporter, putative [Ricinus communis]...   128   4e-28
ref|XP_002308470.1| ABC transporter family, retinal flippase sub...   127   1e-27

>emb|CBI30307.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  134 bits (337), Expect(2) = 4e-30
 Identities = 73/104 (70%), Positives = 85/104 (81%)
 Frame = -3

Query: 355 LQRELXXXXXXXXXXXGDIAYRVTAEASDVADTVYALLNSILPSTLQFIAMATQMVLLSP 176
           LQR+L           GDIAYR+TAEASDVADTV+ALLN+I+PS LQ  AMATQM+ +SP
Sbjct: 249 LQRDLEFFEGGDAVSPGDIAYRMTAEASDVADTVHALLNTIVPSALQLSAMATQMLFISP 308

Query: 175 VLTLISALVIPCISLVIAYLGERLRKISKKAHLSVAKLSEYLNE 44
            L+LISALVIP +SLVIA+LGERLRKISK+AHLS+A LS YLNE
Sbjct: 309 TLSLISALVIPFMSLVIAHLGERLRKISKRAHLSIAALSAYLNE 352



 Score = 21.9 bits (45), Expect(2) = 4e-30
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = -1

Query: 39  LFQVLPSMLFVKA 1
           L ++LPS+LFVKA
Sbjct: 350 LNEILPSILFVKA 362


>ref|XP_002276489.1| PREDICTED: ABC transporter B family member 29, chloroplastic [Vitis
           vinifera]
          Length = 630

 Score =  134 bits (337), Expect(2) = 4e-30
 Identities = 73/104 (70%), Positives = 85/104 (81%)
 Frame = -3

Query: 355 LQRELXXXXXXXXXXXGDIAYRVTAEASDVADTVYALLNSILPSTLQFIAMATQMVLLSP 176
           LQR+L           GDIAYR+TAEASDVADTV+ALLN+I+PS LQ  AMATQM+ +SP
Sbjct: 155 LQRDLEFFEGGDAVSPGDIAYRMTAEASDVADTVHALLNTIVPSALQLSAMATQMLFISP 214

Query: 175 VLTLISALVIPCISLVIAYLGERLRKISKKAHLSVAKLSEYLNE 44
            L+LISALVIP +SLVIA+LGERLRKISK+AHLS+A LS YLNE
Sbjct: 215 TLSLISALVIPFMSLVIAHLGERLRKISKRAHLSIAALSAYLNE 258



 Score = 21.9 bits (45), Expect(2) = 4e-30
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = -1

Query: 39  LFQVLPSMLFVKA 1
           L ++LPS+LFVKA
Sbjct: 256 LNEILPSILFVKA 268


>ref|XP_004149200.1| PREDICTED: ABC transporter B family member 29, chloroplastic-like
           [Cucumis sativus] gi|449522662|ref|XP_004168345.1|
           PREDICTED: ABC transporter B family member 29,
           chloroplastic-like [Cucumis sativus]
          Length = 643

 Score =  129 bits (325), Expect = 2e-28
 Identities = 65/87 (74%), Positives = 77/87 (88%)
 Frame = -3

Query: 304 DIAYRVTAEASDVADTVYALLNSILPSTLQFIAMATQMVLLSPVLTLISALVIPCISLVI 125
           DIAYR+TAEASDVADTVY+LLN+++PS LQ  AMATQM+ +SPVL+LISALVIPC++LVI
Sbjct: 187 DIAYRITAEASDVADTVYSLLNTVVPSMLQLSAMATQMLAISPVLSLISALVIPCVALVI 246

Query: 124 AYLGERLRKISKKAHLSVAKLSEYLNE 44
           AYLGER  +ISK A LS+A LS YLNE
Sbjct: 247 AYLGERQHRISKMASLSIANLSSYLNE 273


>ref|XP_002530326.1| abc transporter, putative [Ricinus communis]
           gi|223530130|gb|EEF32042.1| abc transporter, putative
           [Ricinus communis]
          Length = 650

 Score =  128 bits (322), Expect(2) = 4e-28
 Identities = 66/104 (63%), Positives = 84/104 (80%)
 Frame = -3

Query: 355 LQRELXXXXXXXXXXXGDIAYRVTAEASDVADTVYALLNSILPSTLQFIAMATQMVLLSP 176
           L+R+L           GDIAYR+TA+A+DV+DT+YALLN++LPS LQ  AMA++M+ +SP
Sbjct: 174 LKRQLAFFEGGSGVSSGDIAYRITAQAADVSDTLYALLNTVLPSALQLSAMASRMLAISP 233

Query: 175 VLTLISALVIPCISLVIAYLGERLRKISKKAHLSVAKLSEYLNE 44
           VL+LISA+VIPC++  IA LGERLRKISKKAHLS+A LS YLNE
Sbjct: 234 VLSLISAMVIPCMAFAIACLGERLRKISKKAHLSIATLSAYLNE 277



 Score = 21.2 bits (43), Expect(2) = 4e-28
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = -1

Query: 39  LFQVLPSMLFVKA 1
           L +VLP++LFVKA
Sbjct: 275 LNEVLPAILFVKA 287


>ref|XP_002308470.1| ABC transporter family, retinal flippase subfamily [Populus
           trichocarpa] gi|222854446|gb|EEE91993.1| ABC transporter
           family, retinal flippase subfamily [Populus trichocarpa]
          Length = 570

 Score =  127 bits (318), Expect(2) = 1e-27
 Identities = 65/104 (62%), Positives = 83/104 (79%)
 Frame = -3

Query: 355 LQRELXXXXXXXXXXXGDIAYRVTAEASDVADTVYALLNSILPSTLQFIAMATQMVLLSP 176
           L+REL           GD+AYR+TAEA+DVADT+YALLN+I+PS LQ  AMA++M+++SP
Sbjct: 96  LERELGFFEGGGAVSSGDVAYRITAEAADVADTLYALLNTIVPSALQLSAMASRMLVISP 155

Query: 175 VLTLISALVIPCISLVIAYLGERLRKISKKAHLSVAKLSEYLNE 44
            L+LISA+VIPC +L IAYLG RLRKISKKA L+++ LS YLNE
Sbjct: 156 ALSLISAMVIPCTALAIAYLGTRLRKISKKAQLTISALSAYLNE 199



 Score = 21.2 bits (43), Expect(2) = 1e-27
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = -1

Query: 39  LFQVLPSMLFVKA 1
           L +VLP++LFVKA
Sbjct: 197 LNEVLPAILFVKA 209


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