BLASTX nr result
ID: Cimicifuga21_contig00035801
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00035801 (357 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI30307.3| unnamed protein product [Vitis vinifera] 134 4e-30 ref|XP_002276489.1| PREDICTED: ABC transporter B family member 2... 134 4e-30 ref|XP_004149200.1| PREDICTED: ABC transporter B family member 2... 129 2e-28 ref|XP_002530326.1| abc transporter, putative [Ricinus communis]... 128 4e-28 ref|XP_002308470.1| ABC transporter family, retinal flippase sub... 127 1e-27 >emb|CBI30307.3| unnamed protein product [Vitis vinifera] Length = 723 Score = 134 bits (337), Expect(2) = 4e-30 Identities = 73/104 (70%), Positives = 85/104 (81%) Frame = -3 Query: 355 LQRELXXXXXXXXXXXGDIAYRVTAEASDVADTVYALLNSILPSTLQFIAMATQMVLLSP 176 LQR+L GDIAYR+TAEASDVADTV+ALLN+I+PS LQ AMATQM+ +SP Sbjct: 249 LQRDLEFFEGGDAVSPGDIAYRMTAEASDVADTVHALLNTIVPSALQLSAMATQMLFISP 308 Query: 175 VLTLISALVIPCISLVIAYLGERLRKISKKAHLSVAKLSEYLNE 44 L+LISALVIP +SLVIA+LGERLRKISK+AHLS+A LS YLNE Sbjct: 309 TLSLISALVIPFMSLVIAHLGERLRKISKRAHLSIAALSAYLNE 352 Score = 21.9 bits (45), Expect(2) = 4e-30 Identities = 9/13 (69%), Positives = 12/13 (92%) Frame = -1 Query: 39 LFQVLPSMLFVKA 1 L ++LPS+LFVKA Sbjct: 350 LNEILPSILFVKA 362 >ref|XP_002276489.1| PREDICTED: ABC transporter B family member 29, chloroplastic [Vitis vinifera] Length = 630 Score = 134 bits (337), Expect(2) = 4e-30 Identities = 73/104 (70%), Positives = 85/104 (81%) Frame = -3 Query: 355 LQRELXXXXXXXXXXXGDIAYRVTAEASDVADTVYALLNSILPSTLQFIAMATQMVLLSP 176 LQR+L GDIAYR+TAEASDVADTV+ALLN+I+PS LQ AMATQM+ +SP Sbjct: 155 LQRDLEFFEGGDAVSPGDIAYRMTAEASDVADTVHALLNTIVPSALQLSAMATQMLFISP 214 Query: 175 VLTLISALVIPCISLVIAYLGERLRKISKKAHLSVAKLSEYLNE 44 L+LISALVIP +SLVIA+LGERLRKISK+AHLS+A LS YLNE Sbjct: 215 TLSLISALVIPFMSLVIAHLGERLRKISKRAHLSIAALSAYLNE 258 Score = 21.9 bits (45), Expect(2) = 4e-30 Identities = 9/13 (69%), Positives = 12/13 (92%) Frame = -1 Query: 39 LFQVLPSMLFVKA 1 L ++LPS+LFVKA Sbjct: 256 LNEILPSILFVKA 268 >ref|XP_004149200.1| PREDICTED: ABC transporter B family member 29, chloroplastic-like [Cucumis sativus] gi|449522662|ref|XP_004168345.1| PREDICTED: ABC transporter B family member 29, chloroplastic-like [Cucumis sativus] Length = 643 Score = 129 bits (325), Expect = 2e-28 Identities = 65/87 (74%), Positives = 77/87 (88%) Frame = -3 Query: 304 DIAYRVTAEASDVADTVYALLNSILPSTLQFIAMATQMVLLSPVLTLISALVIPCISLVI 125 DIAYR+TAEASDVADTVY+LLN+++PS LQ AMATQM+ +SPVL+LISALVIPC++LVI Sbjct: 187 DIAYRITAEASDVADTVYSLLNTVVPSMLQLSAMATQMLAISPVLSLISALVIPCVALVI 246 Query: 124 AYLGERLRKISKKAHLSVAKLSEYLNE 44 AYLGER +ISK A LS+A LS YLNE Sbjct: 247 AYLGERQHRISKMASLSIANLSSYLNE 273 >ref|XP_002530326.1| abc transporter, putative [Ricinus communis] gi|223530130|gb|EEF32042.1| abc transporter, putative [Ricinus communis] Length = 650 Score = 128 bits (322), Expect(2) = 4e-28 Identities = 66/104 (63%), Positives = 84/104 (80%) Frame = -3 Query: 355 LQRELXXXXXXXXXXXGDIAYRVTAEASDVADTVYALLNSILPSTLQFIAMATQMVLLSP 176 L+R+L GDIAYR+TA+A+DV+DT+YALLN++LPS LQ AMA++M+ +SP Sbjct: 174 LKRQLAFFEGGSGVSSGDIAYRITAQAADVSDTLYALLNTVLPSALQLSAMASRMLAISP 233 Query: 175 VLTLISALVIPCISLVIAYLGERLRKISKKAHLSVAKLSEYLNE 44 VL+LISA+VIPC++ IA LGERLRKISKKAHLS+A LS YLNE Sbjct: 234 VLSLISAMVIPCMAFAIACLGERLRKISKKAHLSIATLSAYLNE 277 Score = 21.2 bits (43), Expect(2) = 4e-28 Identities = 9/13 (69%), Positives = 12/13 (92%) Frame = -1 Query: 39 LFQVLPSMLFVKA 1 L +VLP++LFVKA Sbjct: 275 LNEVLPAILFVKA 287 >ref|XP_002308470.1| ABC transporter family, retinal flippase subfamily [Populus trichocarpa] gi|222854446|gb|EEE91993.1| ABC transporter family, retinal flippase subfamily [Populus trichocarpa] Length = 570 Score = 127 bits (318), Expect(2) = 1e-27 Identities = 65/104 (62%), Positives = 83/104 (79%) Frame = -3 Query: 355 LQRELXXXXXXXXXXXGDIAYRVTAEASDVADTVYALLNSILPSTLQFIAMATQMVLLSP 176 L+REL GD+AYR+TAEA+DVADT+YALLN+I+PS LQ AMA++M+++SP Sbjct: 96 LERELGFFEGGGAVSSGDVAYRITAEAADVADTLYALLNTIVPSALQLSAMASRMLVISP 155 Query: 175 VLTLISALVIPCISLVIAYLGERLRKISKKAHLSVAKLSEYLNE 44 L+LISA+VIPC +L IAYLG RLRKISKKA L+++ LS YLNE Sbjct: 156 ALSLISAMVIPCTALAIAYLGTRLRKISKKAQLTISALSAYLNE 199 Score = 21.2 bits (43), Expect(2) = 1e-27 Identities = 9/13 (69%), Positives = 12/13 (92%) Frame = -1 Query: 39 LFQVLPSMLFVKA 1 L +VLP++LFVKA Sbjct: 197 LNEVLPAILFVKA 209