BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035700
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat...   298   5e-79
emb|CAN64120.1| hypothetical protein VITISV_037241 [Vitis vinifera]   293   3e-77
ref|XP_002891745.1| pentatricopeptide repeat-containing protein ...   268   8e-70
ref|NP_175740.1| pentatricopeptide repeat-containing protein [Ar...   260   2e-67
ref|XP_004173107.1| PREDICTED: putative pentatricopeptide repeat...   258   1e-66

>ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g53330-like [Vitis vinifera]
          Length = 464

 Score =  298 bits (764), Expect = 5e-79
 Identities = 146/230 (63%), Positives = 179/230 (77%)
 Frame = -2

Query: 692 GRSRLSQQALNIYDRIPSFRCERTVKSLNTLLNALLNCKEFGKIREIYLNIDQYGVPDVC 513
           GR+RL  +A+  ++ IP FRC+RTVKSLN+LLNALL CKEF K   I   ID++  PDVC
Sbjct: 90  GRARLPDRAIQTFESIPEFRCQRTVKSLNSLLNALLKCKEFEKFDGILSGIDKFATPDVC 149

Query: 512 TYNVLINACCSCDLFNDAWSLFVEMPKKGIRPNSVTFATLINALCVNDKLDEAFRMKEDM 333
           TYNVLINACCS     DAW++F EM +K + PN VTF TLI+ LC + +LDEAFR+KEDM
Sbjct: 150 TYNVLINACCSSGSLGDAWNVFDEMLRKHVCPNVVTFGTLISGLCGDSRLDEAFRLKEDM 209

Query: 332 VKNYNLMPNVHAYTSLIKGLCKVNKLDLAFKLKDEMMLEMKLGLDSAIYSTLISGLFRAG 153
           VK +N+ PN   Y SL+KGLC+VN+L LAF+LK EM+   KL LDS IYSTLI+ LF+ G
Sbjct: 210 VKVFNVKPNAFVYASLMKGLCRVNELSLAFELKKEMVAN-KLRLDSGIYSTLIAALFKVG 268

Query: 152 RKGEVAGVFDEMRENGCKPDTVTYNAMISGFCIERDFESAFGILKEMMEK 3
           RK EV  V +EMRENGCKPDTVTYNAMISGFC E+DFE+A+G+L+EM+ K
Sbjct: 269 RKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVAK 318


>emb|CAN64120.1| hypothetical protein VITISV_037241 [Vitis vinifera]
          Length = 418

 Score =  293 bits (749), Expect = 3e-77
 Identities = 143/230 (62%), Positives = 178/230 (77%)
 Frame = -2

Query: 692 GRSRLSQQALNIYDRIPSFRCERTVKSLNTLLNALLNCKEFGKIREIYLNIDQYGVPDVC 513
           GR+RL  +A+  ++ IP FRC+RTVKSLN+LLNALLNCKEF K   I   ID++  P+VC
Sbjct: 90  GRARLPDRAIQTFESIPEFRCQRTVKSLNSLLNALLNCKEFEKFDGILSGIDKFATPNVC 149

Query: 512 TYNVLINACCSCDLFNDAWSLFVEMPKKGIRPNSVTFATLINALCVNDKLDEAFRMKEDM 333
           TYN+LINACC      DAW++F EM +K + PN VTF TLI+ LC + +LDEA R+KEDM
Sbjct: 150 TYNILINACCLSGRLGDAWNVFDEMLRKHVCPNVVTFGTLISGLCRDSRLDEASRLKEDM 209

Query: 332 VKNYNLMPNVHAYTSLIKGLCKVNKLDLAFKLKDEMMLEMKLGLDSAIYSTLISGLFRAG 153
           VK +N+ PN   Y SL+KGLC+VN+L LAF+LK EM+   KL LDS IYSTLI+ LF+ G
Sbjct: 210 VKVFNVKPNAFVYASLMKGLCRVNELSLAFELKKEMVAN-KLRLDSGIYSTLIAALFKVG 268

Query: 152 RKGEVAGVFDEMRENGCKPDTVTYNAMISGFCIERDFESAFGILKEMMEK 3
           RK EV  V +EMRENGCKPDTVTYNAMISGFC E+DFE+A+G+L+EM+ K
Sbjct: 269 RKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVVK 318


>ref|XP_002891745.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297337587|gb|EFH68004.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 472

 Score =  268 bits (685), Expect = 8e-70
 Identities = 128/230 (55%), Positives = 169/230 (73%)
 Frame = -2

Query: 692 GRSRLSQQALNIYDRIPSFRCERTVKSLNTLLNALLNCKEFGKIREIYLNIDQYGVPDVC 513
           GR RL  +AL+++D +P +RC+RTVKSLN+LLN LL C EF K++E   +ID++G PD C
Sbjct: 94  GRGRLPSRALHMFDEMPQYRCQRTVKSLNSLLNTLLKCGEFEKMKERLSSIDEFGKPDAC 153

Query: 512 TYNVLINACCSCDLFNDAWSLFVEMPKKGIRPNSVTFATLINALCVNDKLDEAFRMKEDM 333
           TYN+LI+ C     F+DA  LF EM KK ++P  VTF TLI+ LC N ++ EA +MK+DM
Sbjct: 154 TYNILIHGCSQRGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKNLRVKEALKMKQDM 213

Query: 332 VKNYNLMPNVHAYTSLIKGLCKVNKLDLAFKLKDEMMLEMKLGLDSAIYSTLISGLFRAG 153
           +K Y + P VH Y SL+K LC++ +L  AFKLKDE   E K+ +DSAIYSTLIS L +AG
Sbjct: 214 LKVYGVRPTVHIYASLVKALCQIGELSFAFKLKDE-AYEGKIKVDSAIYSTLISSLIKAG 272

Query: 152 RKGEVAGVFDEMRENGCKPDTVTYNAMISGFCIERDFESAFGILKEMMEK 3
           R  EV+ + +EM E GCKPDTVTYN +I+GFC+E D ESA+ +L EM+EK
Sbjct: 273 RSNEVSRILEEMSEKGCKPDTVTYNVLINGFCVENDSESAYRVLDEMVEK 322


>ref|NP_175740.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75192173|sp|Q9MAG8.1|PPR79_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At1g53330 gi|7769859|gb|AAF69537.1|AC008007_12
           F12M16.23 [Arabidopsis thaliana]
           gi|332194805|gb|AEE32926.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 471

 Score =  260 bits (665), Expect = 2e-67
 Identities = 125/230 (54%), Positives = 167/230 (72%)
 Frame = -2

Query: 692 GRSRLSQQALNIYDRIPSFRCERTVKSLNTLLNALLNCKEFGKIREIYLNIDQYGVPDVC 513
           GR +L  +AL+++D +P +RC+RTVKSLN+LL+ALL C E  K++E   +ID++G PD C
Sbjct: 94  GRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFGKPDAC 153

Query: 512 TYNVLINACCSCDLFNDAWSLFVEMPKKGIRPNSVTFATLINALCVNDKLDEAFRMKEDM 333
           TYN+LI+ C     F+DA  LF EM KK ++P  VTF TLI+ LC + ++ EA +MK DM
Sbjct: 154 TYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDM 213

Query: 332 VKNYNLMPNVHAYTSLIKGLCKVNKLDLAFKLKDEMMLEMKLGLDSAIYSTLISGLFRAG 153
           +K Y + P VH Y SLIK LC++ +L  AFKLKDE   E K+ +D+AIYSTLIS L +AG
Sbjct: 214 LKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDE-AYEGKIKVDAAIYSTLISSLIKAG 272

Query: 152 RKGEVAGVFDEMRENGCKPDTVTYNAMISGFCIERDFESAFGILKEMMEK 3
           R  EV+ + +EM E GCKPDTVTYN +I+GFC+E D ESA  +L EM+EK
Sbjct: 273 RSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEK 322


>ref|XP_004173107.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g53330-like [Cucumis sativus]
          Length = 394

 Score =  258 bits (658), Expect = 1e-66
 Identities = 125/230 (54%), Positives = 167/230 (72%)
 Frame = -2

Query: 692 GRSRLSQQALNIYDRIPSFRCERTVKSLNTLLNALLNCKEFGKIREIYLNIDQYGVPDVC 513
           GR+ L  +A  +++RIPSFRC+RTVKS+N+LL ALL  ++  K+ +++++I  YG PD C
Sbjct: 29  GRAHLPDRAFQVFERIPSFRCKRTVKSVNSLLAALLKNRQLEKMTQVFVDISNYGSPDAC 88

Query: 512 TYNVLINACCSCDLFNDAWSLFVEMPKKGIRPNSVTFATLINALCVNDKLDEAFRMKEDM 333
           T+N+LI+A C C   +  W +F EM K+G++PN VTF TLI  L +N KL EA R+KEDM
Sbjct: 89  TFNILIHAACLCGDLDAVWGVFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEALRLKEDM 148

Query: 332 VKNYNLMPNVHAYTSLIKGLCKVNKLDLAFKLKDEMMLEMKLGLDSAIYSTLISGLFRAG 153
           VK Y + PN   YT+LIKG C V +L+ AFKLK+EM+    + L SA+YSTLIS LF+ G
Sbjct: 149 VKVYMIKPNASIYTTLIKGFCGVGELNFAFKLKEEMVTS-NVKLVSAVYSTLISALFKHG 207

Query: 152 RKGEVAGVFDEMRENGCKPDTVTYNAMISGFCIERDFESAFGILKEMMEK 3
           RK EV+ +  EM ENGCKPDTVTYNA+I+G C E D ESA  ++ EM+EK
Sbjct: 208 RKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEK 257



 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 1/132 (0%)
 Frame = -2

Query: 608 NTLLNALLNCKEFGKIREIYLNIDQYGV-PDVCTYNVLINACCSCDLFNDAWSLFVEMPK 432
           +TL++AL       ++ +I   + + G  PD  TYN +IN  C  +    A  +  EM +
Sbjct: 197 STLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVE 256

Query: 431 KGIRPNSVTFATLINALCVNDKLDEAFRMKEDMVKNYNLMPNVHAYTSLIKGLCKVNKLD 252
           KG +P+  +F T+I  LC   KLD+A  + EDM +     P+V +Y  +  GLC++ +L 
Sbjct: 257 KGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRR-GCPPDVLSYRIIFDGLCEMMQLK 315

Query: 251 LAFKLKDEMMLE 216
            A  + DEM+ +
Sbjct: 316 EATSILDEMIFK 327