BLASTX nr result

ID: Cimicifuga21_contig00035677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035677
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284541.1| PREDICTED: carnitinyl-CoA dehydratase-like [...   118   4e-25
ref|XP_002284547.1| PREDICTED: carnitinyl-CoA dehydratase-like [...   118   6e-25
emb|CAN82902.1| hypothetical protein VITISV_036844 [Vitis vinifera]   115   5e-24
ref|XP_003543071.1| PREDICTED: 3-hydroxypropionyl-coenzyme A deh...   110   2e-22
ref|XP_004168792.1| PREDICTED: fatty acid oxidation complex subu...   107   1e-21

>ref|XP_002284541.1| PREDICTED: carnitinyl-CoA dehydratase-like [Vitis vinifera]
          Length = 238

 Score =  118 bits (296), Expect = 4e-25
 Identities = 58/104 (55%), Positives = 80/104 (76%)
 Frame = -2

Query: 348 LDIGMTFSDYFMDVLKAKLGSPKNLRNMVLQGVKIKAEEAVKTGIIDSAYGSGEETVEAA 169
           LDIG+TF+DYFM +LK+++  P   R+++L+  K+KAEEAV+ GI+DSA+ S E TVEAA
Sbjct: 135 LDIGLTFADYFMAMLKSRISDPAARRDVMLRAKKVKAEEAVRMGIVDSAHDSAESTVEAA 194

Query: 168 MRLGEKLGLRKWNGEIYAEIRKSSVKDVLQVLGLVEKEVLAARL 37
           +RL E+L  RKWNGE+YAEIRK+   +V  +LGL  + V+A RL
Sbjct: 195 VRLAEQLSGRKWNGEVYAEIRKAMHPEVCGLLGLSHRAVVAPRL 238


>ref|XP_002284547.1| PREDICTED: carnitinyl-CoA dehydratase-like [Vitis vinifera]
          Length = 238

 Score =  118 bits (295), Expect = 6e-25
 Identities = 58/104 (55%), Positives = 79/104 (75%)
 Frame = -2

Query: 348 LDIGMTFSDYFMDVLKAKLGSPKNLRNMVLQGVKIKAEEAVKTGIIDSAYGSGEETVEAA 169
           LDIG+TF DYFM ++K+K+  P   R+++L+  K+KAEEAV+ GI+DSA+ S E TVEAA
Sbjct: 135 LDIGLTFPDYFMAMMKSKISDPAARRDVMLRAKKVKAEEAVRMGIVDSAHDSAESTVEAA 194

Query: 168 MRLGEKLGLRKWNGEIYAEIRKSSVKDVLQVLGLVEKEVLAARL 37
           +RL E+L  RKWNGE+YAEIRK+   +V  +LGL  + V+A RL
Sbjct: 195 VRLAEQLSGRKWNGEVYAEIRKAMHPEVCGLLGLSHRAVVAPRL 238


>emb|CAN82902.1| hypothetical protein VITISV_036844 [Vitis vinifera]
          Length = 238

 Score =  115 bits (287), Expect = 5e-24
 Identities = 56/101 (55%), Positives = 77/101 (76%)
 Frame = -2

Query: 348 LDIGMTFSDYFMDVLKAKLGSPKNLRNMVLQGVKIKAEEAVKTGIIDSAYGSGEETVEAA 169
           LDIG+TF+DYFM +LK+K+  P   R+++L+  K+KAEEAV+ GI+DS + S E TVEAA
Sbjct: 135 LDIGLTFADYFMAMLKSKISDPAARRDVMLRAKKVKAEEAVRMGIVDSTHDSAESTVEAA 194

Query: 168 MRLGEKLGLRKWNGEIYAEIRKSSVKDVLQVLGLVEKEVLA 46
           +RL E+L  RKWNGE+YAEIRK+   +V  +LGL  + V+A
Sbjct: 195 VRLAEQLSGRKWNGEVYAEIRKAMHPEVCGLLGLSHRAVVA 235


>ref|XP_003543071.1| PREDICTED: 3-hydroxypropionyl-coenzyme A dehydratase-like [Glycine
           max]
          Length = 241

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/101 (52%), Positives = 74/101 (73%)
 Frame = -2

Query: 348 LDIGMTFSDYFMDVLKAKLGSPKNLRNMVLQGVKIKAEEAVKTGIIDSAYGSGEETVEAA 169
           +D+G+    YF  V+++K+ SP  +R++VL G K+ A EAV+ GI+DSA+ S E TVEAA
Sbjct: 139 VDLGLPLPGYFAAVIRSKIRSPAVMRDLVLGGAKLTAAEAVRMGIVDSAHDSAESTVEAA 198

Query: 168 MRLGEKLGLRKWNGEIYAEIRKSSVKDVLQVLGLVEKEVLA 46
           MRLGE+L  RKW GE+YAEIRKS   D  +VLGL +K +++
Sbjct: 199 MRLGEQLARRKWVGEVYAEIRKSLYPDACKVLGLTQKAIVS 239


>ref|XP_004168792.1| PREDICTED: fatty acid oxidation complex subunit alpha-like [Cucumis
           sativus]
          Length = 239

 Score =  107 bits (267), Expect = 1e-21
 Identities = 50/104 (48%), Positives = 76/104 (73%)
 Frame = -2

Query: 348 LDIGMTFSDYFMDVLKAKLGSPKNLRNMVLQGVKIKAEEAVKTGIIDSAYGSGEETVEAA 169
           LD+G+T  DYFM + K+K+GS   +R+++L+G+K++ E AV+ GI+DSA+   +  V AA
Sbjct: 136 LDLGLTLPDYFMALFKSKIGSSLAMRDLILRGMKVRGEAAVRMGIVDSAHDGEDSVVNAA 195

Query: 168 MRLGEKLGLRKWNGEIYAEIRKSSVKDVLQVLGLVEKEVLAARL 37
           +RLGE+L  R W+GE+YAEIRKS   +V +VLGL  K +  ++L
Sbjct: 196 VRLGEQLAGRNWDGEVYAEIRKSLYPEVSEVLGLPGKPISISKL 239


Top