BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035567
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containi...   128   4e-28
ref|XP_002518652.1| pentatricopeptide repeat-containing protein,...   103   2e-20
ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containi...   101   7e-20
ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containi...   101   7e-20
ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containi...    89   3e-16

>ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
           [Vitis vinifera]
          Length = 811

 Score =  128 bits (322), Expect = 4e-28
 Identities = 60/109 (55%), Positives = 82/109 (75%)
 Frame = -2

Query: 329 GKSNDPNRGKPWASDRLSPQGQIILHTLLNSHSKDIRIDEILHTLIQQHELESEFDLETL 150
           GKS D NRGKPW+  RLSP GQ IL TL++      +IDE+L  L +Q   ES+F +E+L
Sbjct: 67  GKSQDANRGKPWSHGRLSPPGQRILQTLIDPTFNLAQIDELLLELFEQQPGESDFSVESL 126

Query: 149 SVDILGIVKGLGFHKKCELALNIFKWIRNHKDSDFLLKGPVVAVLITTL 3
           S+D+LGIVKGLGF+KKC+ AL +F+W+RN K+S+ LL G ++AV+I+ L
Sbjct: 127 SLDVLGIVKGLGFYKKCDTALRVFEWVRNRKESELLLNGSIIAVIISIL 175


>ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542033|gb|EEF43577.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 827

 Score =  103 bits (256), Expect = 2e-20
 Identities = 50/112 (44%), Positives = 76/112 (67%), Gaps = 4/112 (3%)
 Frame = -2

Query: 326 KSNDPNRGKPWASDRLSPQGQIILHTLLNSHSKDIRIDEILHTLIQQHELE----SEFDL 159
           K+ DPNRGKPWAS RLS  GQ +L +L++   +   +D++L  L + +  E    S    
Sbjct: 81  KARDPNRGKPWASHRLSTLGQQVLDSLIDPCFEGSELDKVLSQLFEYYHKEELSLSSGTW 140

Query: 158 ETLSVDILGIVKGLGFHKKCELALNIFKWIRNHKDSDFLLKGPVVAVLITTL 3
            +LS+D+LGI+KGLGF+KKC++A+++F W+R  +D + +L   VVAV+IT L
Sbjct: 141 NSLSMDVLGIIKGLGFYKKCDMAMSVFSWVREREDFESVLNCSVVAVIITML 192


>ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score =  101 bits (251), Expect = 7e-20
 Identities = 54/109 (49%), Positives = 72/109 (66%)
 Frame = -2

Query: 329 GKSNDPNRGKPWASDRLSPQGQIILHTLLNSHSKDIRIDEILHTLIQQHELESEFDLETL 150
           G+S+DPNRGKPW+  RLS QGQ IL +LLN       +DEIL  L +       F  +++
Sbjct: 87  GRSHDPNRGKPWSHHRLSTQGQRILDSLLNPEFDSSSLDEILLQLFETSSDGLNFTSDSV 146

Query: 149 SVDILGIVKGLGFHKKCELALNIFKWIRNHKDSDFLLKGPVVAVLITTL 3
           S DILGI+KGL F+KK ELAL +F ++RN +D   +L   VVAV+I+ L
Sbjct: 147 SFDILGIIKGLVFYKKNELALCVFYFVRNREDFASILSNSVVAVIISVL 195


>ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score =  101 bits (251), Expect = 7e-20
 Identities = 54/109 (49%), Positives = 72/109 (66%)
 Frame = -2

Query: 329 GKSNDPNRGKPWASDRLSPQGQIILHTLLNSHSKDIRIDEILHTLIQQHELESEFDLETL 150
           G+S+DPNRGKPW+  RLS QGQ IL +LLN       +DEIL  L +       F  +++
Sbjct: 87  GRSHDPNRGKPWSHHRLSTQGQRILDSLLNPEFDSSSLDEILLQLFETSSDGLNFTSDSV 146

Query: 149 SVDILGIVKGLGFHKKCELALNIFKWIRNHKDSDFLLKGPVVAVLITTL 3
           S DILGI+KGL F+KK ELAL +F ++RN +D   +L   VVAV+I+ L
Sbjct: 147 SFDILGIIKGLVFYKKNELALCVFYFVRNREDFASILSNSVVAVIISVL 195


>ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Glycine max]
          Length = 804

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 49/113 (43%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
 Frame = -2

Query: 329 GKSNDPNRGKPWASDRLSPQGQIILHTLLNSHS----KDIRIDEILHTLIQQHELESEFD 162
           GKS DPNRGKPW+  RLSP GQ ILHTL +S+S     ++ +D +L  L+         D
Sbjct: 63  GKSLDPNRGKPWSPHRLSPTGQQILHTLSHSNSLHLDLELDLDHVLRPLLLS-------D 115

Query: 161 LETLSVDILGIVKGLGFHKKCELALNIFKWIRNHKDSDFLLKGPVVAVLITTL 3
               + DILGI+K LGF  KC+LAL +F W+R +  +  L     + V+I  L
Sbjct: 116 HPHPASDILGIIKALGFSNKCDLALAVFHWVRTNNSNTNLFSSSAIPVIIKIL 168