BLASTX nr result

ID: Cimicifuga21_contig00035548 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035548
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298611.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15
ref|XP_002332079.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
ref|XP_002298612.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002448133.1| hypothetical protein SORBIDRAFT_06g021880 [S...    76   2e-12
ref|XP_002303850.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12

>ref|XP_002298611.1| predicted protein [Populus trichocarpa] gi|222845869|gb|EEE83416.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 48/144 (33%), Positives = 81/144 (56%)
 Frame = +1

Query: 22  WKYILNLEDLVDAGVKVRTQEPDYGLLGIMFFSAILSIPLINFEEGMRVLLANLIALEQC 201
           W+ I ++ +LVDAG+K++  +    +L I F + +L IP +  +E   V++ NLI+ EQC
Sbjct: 261 WEPIPSVTNLVDAGIKLKVGK-SRSILDIKFENGVLEIPPLLIQETTEVIIRNLISYEQC 319

Query: 202 RGDYRDQITSYAMVLSCLINSGKDVKILRDRGILQCTFLEDNKIVAQIHSLCEGAIIRTF 381
                D+ITSYA++L  LIN+ KD+      GI+   +L  ++     + L + A ++ +
Sbjct: 320 SPKCTDRITSYAVLLDNLINTTKDMDAFTSSGIID-NWLNPDEATQFFNKLYQDAYLKKY 378

Query: 382 CYKGLCNQMERLCWSKYGAWRRLL 453
            Y  LC +M R    ++  WR LL
Sbjct: 379 YYLQLCQEMNRYHQRRFPRWRALL 402


>ref|XP_002332079.1| predicted protein [Populus trichocarpa] gi|222831965|gb|EEE70442.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 4/149 (2%)
 Frame = +1

Query: 25  KYILNLEDLVDAGVKVRTQEPDYGL-LGIMFFSAILSIPLINFEEGMRVLLANLIALEQC 201
           ++I + ++L DAG+K   QE  +GL LG+ F   ++ IP +  ++    L  NLIA EQC
Sbjct: 243 EFIRSAKELKDAGIKFGKQEGSFGLFLGVRFEKDMIKIPCLKIDDTTESLFRNLIAYEQC 302

Query: 202 RGDYRDQITSYAMVLSCLINSGKDVKILRDRGILQCTFLEDNKIVAQIHSLCEGAIIR-- 375
                  +T Y  ++ CLIN+ +DV+ILR RGI++    +D  +    + L    +I   
Sbjct: 303 SQRQHLYVTDYITLMDCLINTREDVRILRHRGIIENGLGDDEMVCTLFNKLGINVMISDR 362

Query: 376 -TFCYKGLCNQMERLCWSKYGAWRRLLRR 459
             F Y  L   +E+ C  +   W   LRR
Sbjct: 363 GRFYYAQLFEGVEKHCAQRRNVWLVKLRR 391


>ref|XP_002298612.1| predicted protein [Populus trichocarpa] gi|222845870|gb|EEE83417.1|
           predicted protein [Populus trichocarpa]
          Length = 437

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 46/144 (31%), Positives = 78/144 (54%)
 Frame = +1

Query: 22  WKYILNLEDLVDAGVKVRTQEPDYGLLGIMFFSAILSIPLINFEEGMRVLLANLIALEQC 201
           W+ + ++ +LVDAG+K++  E    +L I F +  L IP +  +E   V++ NLI+ EQC
Sbjct: 262 WEPMPSVTNLVDAGIKLKVGE-SRSILDIKFENGFLEIPPLLVQETTEVIIRNLISYEQC 320

Query: 202 RGDYRDQITSYAMVLSCLINSGKDVKILRDRGILQCTFLEDNKIVAQIHSLCEGAIIRTF 381
                D+ITSYA++L  LIN+ KD+      GI+   +L  ++     + L   A ++ +
Sbjct: 321 SPKCTDRITSYAVLLDNLINTTKDMDTFTSSGIID-NWLNPDEATQFFNKLYLDAYLKKY 379

Query: 382 CYKGLCNQMERLCWSKYGAWRRLL 453
            Y  LC ++      ++  WR LL
Sbjct: 380 YYLKLCRKVNMYYRRRFPRWRALL 403


>ref|XP_002448133.1| hypothetical protein SORBIDRAFT_06g021880 [Sorghum bicolor]
           gi|241939316|gb|EES12461.1| hypothetical protein
           SORBIDRAFT_06g021880 [Sorghum bicolor]
          Length = 549

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 49/145 (33%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
 Frame = +1

Query: 25  KYILNLEDLVDAGVKVRTQEPDYGLLGIMFFSAILSIPLINFEEGMRVLLANLIALEQCR 204
           +++  + +L +AG++ R    D     I F + +L IP I   +G ++L  NLIA EQC 
Sbjct: 362 QFVHCVSELREAGIRCRRHNTDR-FWDIKFDNGVLHIPRILVHDGSKLLFLNLIAFEQCH 420

Query: 205 GDYR----DQITSYAMVLSCLINSGKDVKILRDRGILQCTFLEDNKIVAQIHSLCEGAI- 369
            D      + ITSYA+ +  LINS +DVK L DRGI++     D ++    + LCE  + 
Sbjct: 421 MDIATPGGNNITSYAIFMDNLINSAEDVKYLHDRGIIEHWLGSDAEVADLFNRLCEEVVF 480

Query: 370 -IRTFCYKGLCNQMERLCWSKYGAW 441
            I      GL +Q+ R    K+  W
Sbjct: 481 DINDSYLSGLSDQVNRYYDYKWSTW 505


>ref|XP_002303850.1| predicted protein [Populus trichocarpa] gi|222841282|gb|EEE78829.1|
           predicted protein [Populus trichocarpa]
          Length = 332

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 4/151 (2%)
 Frame = +1

Query: 16  SDWKYILNLEDLVDAGVKVRTQEPDYGLLGIMFF-SAILSIPLINFEEGMRVLLANLIAL 192
           +DW +I N ++L ++G+K + +E    L  ++F  +  + IP +   +    L  NL+A 
Sbjct: 145 NDWYFIRNAKELQESGIKFKKREGSRRLFDVVFLENGTIEIPCLKIYDTTESLFRNLVAY 204

Query: 193 EQCRGDYRDQITSYAMVLSCLINSGKDVKILRDRGILQCTFLEDNKIVAQIHSLCEGAII 372
           EQC       +T Y  ++ CLIN+ +DV+ILR  GI++    +D  + +  ++L    I+
Sbjct: 205 EQCSRCKHLYVTDYITLMDCLINNQEDVQILRHSGIIENGLGDDGMVCSLFNNLGINVIL 264

Query: 373 ---RTFCYKGLCNQMERLCWSKYGAWRRLLR 456
              R F Y  + N ++  C  K   W   LR
Sbjct: 265 SHRRYFYYDQVFNSVKEHCNRKRNVWLAKLR 295


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