BLASTX nr result

ID: Cimicifuga21_contig00035506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035506
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274330.1| PREDICTED: uncharacterized protein LOC100250...    72   6e-11
ref|XP_003517960.1| PREDICTED: uncharacterized protein LOC100783...    69   4e-10
ref|XP_003539136.1| PREDICTED: uncharacterized protein LOC100796...    67   2e-09
ref|XP_004140484.1| PREDICTED: uncharacterized protein LOC101203...    67   2e-09
ref|XP_002511671.1| conserved hypothetical protein [Ricinus comm...    56   3e-06

>ref|XP_002274330.1| PREDICTED: uncharacterized protein LOC100250589 [Vitis vinifera]
          Length = 487

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 44/89 (49%), Positives = 52/89 (58%), Gaps = 9/89 (10%)
 Frame = +2

Query: 38  MPDMDPSTKPPQISDMFHKFALAFKTKTI-----XXXXXXXXXXXXXXXXXXSLLDSAEE 202
           MP+MD S+KPPQIS+MF KFALAFK+KT                        SLLDSAEE
Sbjct: 1   MPEMDGSSKPPQISEMFQKFALAFKSKTFEFFADEDPAGAGAAADSYDSDGFSLLDSAEE 60

Query: 203 NITGQRVVVIKPDS----APNKPNLLPQT 277
            ITGQ+VVVIKPD      P+ P  + +T
Sbjct: 61  VITGQKVVVIKPDQPAFPKPSPPVAMEKT 89


>ref|XP_003517960.1| PREDICTED: uncharacterized protein LOC100783971 [Glycine max]
          Length = 506

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 46/91 (50%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
 Frame = +2

Query: 38  MPDMDPST-KPPQISDMFHKFALAFKTKT---IXXXXXXXXXXXXXXXXXXSLLDSAEEN 205
           MP+MD S+ KPPQIS+MF KFALAFKTKT                      SLLDS EE 
Sbjct: 1   MPEMDGSSAKPPQISEMFQKFALAFKTKTFEFFSEEENNNASPLFDDIDGFSLLDSTEEI 60

Query: 206 ITGQRVVVIKPDSAPNK----PNLLPQTVIP 286
           I  Q+VVVIKPD  P+     P LLPQ   P
Sbjct: 61  IPDQKVVVIKPDPDPSNNSSPPPLLPQPQSP 91


>ref|XP_003539136.1| PREDICTED: uncharacterized protein LOC100796904 [Glycine max]
          Length = 510

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 41/75 (54%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
 Frame = +2

Query: 38  MPDMDPST-KPPQISDMFHKFALAFKTKT--IXXXXXXXXXXXXXXXXXXSLLDSAEENI 208
           MP+MD S+ KPPQIS+MF KFALAFKTKT                     SLLDS EE I
Sbjct: 1   MPEMDGSSAKPPQISEMFQKFALAFKTKTFEFFSEEENNASPLLDDIDGFSLLDSTEEII 60

Query: 209 TGQRVVVIKPDSAPN 253
           T Q+VVVIKPD  P+
Sbjct: 61  TDQKVVVIKPDPDPS 75


>ref|XP_004140484.1| PREDICTED: uncharacterized protein LOC101203555 [Cucumis sativus]
           gi|449505090|ref|XP_004162373.1| PREDICTED:
           uncharacterized protein LOC101226600 [Cucumis sativus]
          Length = 494

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 45/85 (52%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
 Frame = +2

Query: 38  MPDMDPST--KPPQISDMFHKFALAFKTKTIXXXXXXXXXXXXXXXXXXSLLDSAEENIT 211
           M DMD S+  K PQIS MF KFALAFKTKT                   SLLDSAEE IT
Sbjct: 1   MCDMDGSSNYKTPQISQMFQKFALAFKTKTFEFFADDDAPDDSDGF---SLLDSAEEIIT 57

Query: 212 GQRVVVIKPDSAPNKPNLLPQTVIP 286
            Q+VVVIKPDSA +    +P  +IP
Sbjct: 58  DQKVVVIKPDSAFDFFPTVPSNLIP 82


>ref|XP_002511671.1| conserved hypothetical protein [Ricinus communis]
           gi|223548851|gb|EEF50340.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 429

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 30/65 (46%), Positives = 37/65 (56%)
 Frame = +2

Query: 62  KPPQISDMFHKFALAFKTKTIXXXXXXXXXXXXXXXXXXSLLDSAEENITGQRVVVIKPD 241
           K P IS+MF KFALAFKTKT                   SLLDSAE+ I  Q+V+++KPD
Sbjct: 10  KAPPISEMFQKFALAFKTKTFEFFADEETATAAADDDGLSLLDSAEDFIPDQKVIILKPD 69

Query: 242 SAPNK 256
              N+
Sbjct: 70  QPFNQ 74


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