BLASTX nr result

ID: Cimicifuga21_contig00035490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035490
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]    60   2e-07
gb|AAO23078.1| polyprotein [Glycine max]                               57   2e-06

>emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]
          Length = 1360

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/69 (37%), Positives = 41/69 (59%)
 Frame = -2

Query: 213 VRIDFPQFNGENLED*IFRAEQY*ALHGIRDDQLVSIASIHLTGDTVVWNRWMQHSLGPL 34
           +++ FP+FNG++    I++AEQY     I   Q V +AS HL G  + W+RW+    GPL
Sbjct: 83  LKLSFPKFNGDDPTGWIYKAEQYFDFMNITPGQQVQLASFHLEGIALQWHRWLTKFRGPL 142

Query: 33  IWRNFARSL 7
            W  F +++
Sbjct: 143 TWDEFTKAV 151


>gb|AAO23078.1| polyprotein [Glycine max]
          Length = 1552

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/70 (40%), Positives = 44/70 (62%)
 Frame = -2

Query: 216 SVRIDFPQFNGENLED*IFRAEQY*ALHGIRDDQLVSIASIHLTGDTVVWNRWMQHSLGP 37
           SV++DFP+F+G+N+ D IF+AEQ+   +   D   + IAS+HL  D V W + +Q +   
Sbjct: 97  SVKLDFPRFDGKNVMDWIFKAEQFFDYYATPDADRLIIASVHLDQDVVPWYQMLQKTEPF 156

Query: 36  LIWRNFARSL 7
             W+ F R+L
Sbjct: 157 SSWQAFTRAL 166


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