BLASTX nr result

ID: Cimicifuga21_contig00035482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035482
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518985.1| conserved hypothetical protein [Ricinus comm...    59   5e-07
ref|XP_002277020.2| PREDICTED: inactive poly [ADP-ribose] polyme...    57   2e-06

>ref|XP_002518985.1| conserved hypothetical protein [Ricinus communis]
           gi|223541972|gb|EEF43518.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 536

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
 Frame = +3

Query: 3   PIAWIDDVGRCQFPETCVVNDDLHECIQSG-GRENSPIL-DSNGTHEFKLKLKIQVTTDG 176
           PIAWID+ G C FPE  + ++DL EC Q     +  P+  +S G HE KL+L+I +    
Sbjct: 150 PIAWIDEAGGCFFPEVYIDDEDLDECCQHNYANDQGPMFRESYGPHEIKLQLEIDINGVD 209

Query: 177 NLKNRDCSEGSINHVKRCEI 236
             K ++CS  S   VK   I
Sbjct: 210 QSKLKECSGESNAFVKHIHI 229


>ref|XP_002277020.2| PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like [Vitis
           vinifera]
          Length = 598

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
 Frame = +3

Query: 3   PIAWIDDVGRCQFPETCVVNDDLHECIQSGGRENSPILDSNGTHEFKLKLKIQVTTDGNL 182
           PIAWID+ G C FPE    + + H C      +     +  G+H+ KL+L+I V   G+ 
Sbjct: 134 PIAWIDEAGNCFFPEIFSGDAESHNCCGHECGQQLLFREPYGSHDIKLQLEIDVNDAGHT 193

Query: 183 KNRDCSEGS---INHV----------KRCEIEDKCKLVNDGALDQ 278
             ++CS  S   I HV             E+ED C   +D  +D+
Sbjct: 194 NLKECSGESNPVIKHVLIDKNPASDQNDVEVEDSCNKTSDAKMDK 238


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