BLASTX nr result

ID: Cimicifuga21_contig00035460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035460
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66028.1| hypothetical protein VITISV_020472 [Vitis vinifera]    67   1e-09
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]    60   1e-07
ref|XP_002336360.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
emb|CAN72498.1| hypothetical protein VITISV_010513 [Vitis vinifera]    58   7e-07
emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera]    57   2e-06

>emb|CAN66028.1| hypothetical protein VITISV_020472 [Vitis vinifera]
          Length = 823

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 37/73 (50%), Positives = 49/73 (67%)
 Frame = -2

Query: 241 LAKRFSSRSQSHIMYLKREL*NLKKSSKTMAEYYLHAKNIANNLVAAGHSISCTDLQHAI 62
           L  RFSS+S SHI +LKR+L  L +S+K+ +EY  +AKN+A+ L AAG  I   DL   +
Sbjct: 62  LQTRFSSQSCSHISHLKRQLQTLTQSTKSCSEYLENAKNLADQLAAAGKPIDDQDLISFL 121

Query: 61  LGGLDSAYDHIVT 23
           LGGL S+Y   VT
Sbjct: 122 LGGLQSSYTPFVT 134


>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/73 (45%), Positives = 46/73 (63%)
 Frame = -2

Query: 241 LAKRFSSRSQSHIMYLKREL*NLKKSSKTMAEYYLHAKNIANNLVAAGHSISCTDLQHAI 62
           L  RFSS+S+S I +LKR+L  L + +K+ +EY   AK +A+ L AAG  +   DL   +
Sbjct: 110 LQTRFSSQSRSRISHLKRQLQTLTQGTKSCSEYLESAKTLADQLAAAGKPVDDQDLISFL 169

Query: 61  LGGLDSAYDHIVT 23
           LGGL S+Y   VT
Sbjct: 170 LGGLQSSYTPFVT 182


>ref|XP_002336360.1| predicted protein [Populus trichocarpa] gi|222834786|gb|EEE73249.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/77 (33%), Positives = 47/77 (61%)
 Frame = -2

Query: 241 LAKRFSSRSQSHIMYLKREL*NLKKSSKTMAEYYLHAKNIANNLVAAGHSISCTDLQHAI 62
           LAK FSS+S++ ++ L+ EL N +K ++   ++++  K + + L  A H++ C ++   +
Sbjct: 52  LAKSFSSQSRARVIQLRTELVNTRKGAQLAHDFFMQVKRMIDELAVADHALHCDEIISYL 111

Query: 61  LGGLDSAYDHIVTVLTA 11
           L GL   YD  VT +TA
Sbjct: 112 LSGLGHDYDSFVTTITA 128


>emb|CAN72498.1| hypothetical protein VITISV_010513 [Vitis vinifera]
          Length = 1394

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/77 (44%), Positives = 44/77 (57%)
 Frame = -2

Query: 241 LAKRFSSRSQSHIMYLKREL*NLKKSSKTMAEYYLHAKNIANNLVAAGHSISCTDLQHAI 62
           L K FS+ S++ I+ L+ E    KK +  M EY L  K I+NNL A G  +  TD    +
Sbjct: 117 LHKIFSASSKARILQLRLEFQTTKKGADPMLEYILKIKTISNNLAAIGEPVKETDHILQL 176

Query: 61  LGGLDSAYDHIVTVLTA 11
           LGGL S Y+ IV  LTA
Sbjct: 177 LGGLGSEYNSIVASLTA 193


>emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera]
          Length = 2220

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/77 (40%), Positives = 46/77 (59%)
 Frame = -2

Query: 247  DVLAKRFSSRSQSHIMYLKREL*NLKKSSKTMAEYYLHAKNIANNLVAAGHSISCTDLQH 68
            + L K FSS S++ IM L+ EL + KK S +M +Y +  K  A++L A G  +S  D   
Sbjct: 964  NALEKTFSSSSRARIMQLRLELQSTKKGSLSMIDYIMKVKGAADSLAAIGEPVSEQDQVM 1023

Query: 67   AILGGLDSAYDHIVTVL 17
             +LGGL S Y+ +VT +
Sbjct: 1024 NLLGGLGSDYNAVVTAI 1040


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