BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035364
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275476.2| PREDICTED: ubiquitin carboxyl-terminal hydro...    87   2e-15
ref|XP_002532774.1| ubiquitin-specific protease, putative [Ricin...    77   1e-12
ref|XP_002310049.1| predicted protein [Populus trichocarpa] gi|2...    65   8e-09
ref|XP_003532855.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    64   1e-08
ref|XP_003630152.1| Ubiquitin carboxyl-terminal hydrolase [Medic...    63   3e-08

>ref|XP_002275476.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27-like [Vitis
           vinifera]
          Length = 641

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 51/121 (42%), Positives = 76/121 (62%), Gaps = 6/121 (4%)
 Frame = -3

Query: 350 MEKRGEVNIYSLIHRLKHDGYGLLS-----SVSHYHV-VAGILGVSSLVLAIKNQKIGHL 189
           M+  G V++   I + KH G+ +LS     S+S  H+ VAG+L ++  V+AIK+ K+G+ 
Sbjct: 1   MKIEGNVSVSFSIRKFKH-GFWILSRIKWFSISGLHISVAGLLSIAGFVVAIKDNKMGNF 59

Query: 188 RDLLSKMERIGFSKKSRFIAGLQNLGSNCFLNVVLQALASCESFQQYIQSVGEINGVSVE 9
             L    ER  FS +     GLQNLG+NCFLNV+LQALASC  F+Q++  + E +  S++
Sbjct: 60  GSLPWSSERGDFSSELCLAPGLQNLGNNCFLNVILQALASCFCFRQFLHRIMEESKSSLD 119

Query: 8   E 6
           E
Sbjct: 120 E 120


>ref|XP_002532774.1| ubiquitin-specific protease, putative [Ricinus communis]
           gi|223527484|gb|EEF29613.1| ubiquitin-specific protease,
           putative [Ricinus communis]
          Length = 503

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 52/105 (49%), Positives = 64/105 (60%), Gaps = 8/105 (7%)
 Frame = -3

Query: 326 IYSLIHRLKHDGYGLLS------SVSHYHV-VAGILGVSSLVLA-IKNQKIGHLRDLLSK 171
           I S+I  L+H GY  LS      S S +HV VAG LGV+ L+LA IK+    +L  L   
Sbjct: 6   INSIISNLRH-GYKSLSHLKWVSSSSGFHVPVAGALGVAGLILALIKDHNFDNLTRLSWF 64

Query: 170 MERIGFSKKSRFIAGLQNLGSNCFLNVVLQALASCESFQQYIQSV 36
             R    +K   + GLQNLG+NCFLNV+LQALASC  FQ Y+Q V
Sbjct: 65  SNRETHLQKLYLVPGLQNLGNNCFLNVILQALASCSYFQAYLQKV 109


>ref|XP_002310049.1| predicted protein [Populus trichocarpa] gi|222852952|gb|EEE90499.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 39/83 (46%), Positives = 53/83 (63%), Gaps = 8/83 (9%)
 Frame = -3

Query: 254 VAGILGVSSLVLA-IKNQKIGHLRDL-------LSKMERIGFSKKSRFIAGLQNLGSNCF 99
           +A +LGV+ LVLA IK+ K  +L+         L++ E     KK   + GLQNLG+NCF
Sbjct: 11  LAAVLGVAGLVLALIKDPKSWNLKLSVLPSWLELNQRENNNRPKKLFLLPGLQNLGNNCF 70

Query: 98  LNVVLQALASCESFQQYIQSVGE 30
           LNV+LQAL SC +FQ ++Q V E
Sbjct: 71  LNVILQALGSCSNFQSFLQKVIE 93


>ref|XP_003532855.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27-like [Glycine
           max]
          Length = 563

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
 Frame = -3

Query: 254 VAGILGVSSLVLAIKNQKIGHLRDLLSKMERIGFS-KKSRFIAGLQNLGSNCFLNVVLQA 78
           V G++G+   +LA+K+ K+     L         S +KS F+ GLQNL +NCFLNVVLQA
Sbjct: 15  VGGLVGIVGAILALKDAKVAIPFTLPWSFATDNSSFEKSLFVPGLQNLQNNCFLNVVLQA 74

Query: 77  LASCESFQQYIQSV-GEINGVSVEE 6
           LASC  FQ ++ SV GE     ++E
Sbjct: 75  LASCFCFQSFLHSVIGECGSKDLDE 99


>ref|XP_003630152.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
           gi|355524174|gb|AET04628.1| Ubiquitin carboxyl-terminal
           hydrolase [Medicago truncatula]
          Length = 406

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 41/99 (41%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
 Frame = -3

Query: 305 LKHDGYGLLSSVSHYHVVA--GILGVSSLVLAIKNQKIGH-------LRDLLSKMERIGF 153
           L  D    LSS +   V A   I  +++ VLA+K+ K          L  LL    +   
Sbjct: 5   LSFDTNWTLSSSTRIRVAAVTAIAAIAASVLALKDAKSSKPIRSRFSLASLLPDYNQDNH 64

Query: 152 SKKSRFIAGLQNLGSNCFLNVVLQALASCESFQQYIQSV 36
           S K  F+ GL+NLG+NCFLNVVLQALASC  FQ ++  V
Sbjct: 65  SDKPIFVPGLRNLGNNCFLNVVLQALASCVCFQSFLDDV 103