BLASTX nr result

ID: Cimicifuga21_contig00035356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035356
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a...   138   5e-31
emb|CBI20740.3| unnamed protein product [Vitis vinifera]              138   5e-31
ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis...   127   9e-28
ref|XP_003523657.1| PREDICTED: endoribonuclease Dicer homolog 3a...   115   5e-24
ref|XP_004144277.1| PREDICTED: endoribonuclease Dicer homolog 3a...   113   1e-23

>ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
          Length = 1648

 Score =  138 bits (347), Expect = 5e-31
 Identities = 66/104 (63%), Positives = 84/104 (80%)
 Frame = -3

Query: 313 EFYHKCGNKPKIFGMTASPVVRKGVSSTMDCEEQISTLESLLDSKAYTIEDRSELQIFVP 134
           EFYHK  +KPKIFGMTASPV+RKGVSS+MDCE QIS LES+LD + YTIEDR+EL++F+P
Sbjct: 192 EFYHKSVDKPKIFGMTASPVIRKGVSSSMDCENQISELESILDCQIYTIEDRTELEVFIP 251

Query: 133 LATEVKRYYDHNFFLHEELKKKLEDSWSKFNELLVNKQSSLPSQ 2
            A E+ R+YD + F + +LK KL+ SWSKF+ LL+N Q S  +Q
Sbjct: 252 SAKEINRFYDASQFHNLDLKAKLKSSWSKFDNLLLNLQGSPMTQ 295


>emb|CBI20740.3| unnamed protein product [Vitis vinifera]
          Length = 1688

 Score =  138 bits (347), Expect = 5e-31
 Identities = 66/104 (63%), Positives = 84/104 (80%)
 Frame = -3

Query: 313 EFYHKCGNKPKIFGMTASPVVRKGVSSTMDCEEQISTLESLLDSKAYTIEDRSELQIFVP 134
           EFYHK  +KPKIFGMTASPV+RKGVSS+MDCE QIS LES+LD + YTIEDR+EL++F+P
Sbjct: 200 EFYHKSVDKPKIFGMTASPVIRKGVSSSMDCENQISELESILDCQIYTIEDRTELEVFIP 259

Query: 133 LATEVKRYYDHNFFLHEELKKKLEDSWSKFNELLVNKQSSLPSQ 2
            A E+ R+YD + F + +LK KL+ SWSKF+ LL+N Q S  +Q
Sbjct: 260 SAKEINRFYDASQFHNLDLKAKLKSSWSKFDNLLLNLQGSPMTQ 303


>ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis]
           gi|223544646|gb|EEF46162.1| Ribonuclease III, putative
           [Ricinus communis]
          Length = 1660

 Score =  127 bits (319), Expect = 9e-28
 Identities = 60/103 (58%), Positives = 79/103 (76%)
 Frame = -3

Query: 313 EFYHKCGNKPKIFGMTASPVVRKGVSSTMDCEEQISTLESLLDSKAYTIEDRSELQIFVP 134
           EFYHK  NKPKIFGMTASPVV+KGVSS +DCE+QIS LE++LDS+ YTIEDR+E+ + VP
Sbjct: 208 EFYHKLSNKPKIFGMTASPVVQKGVSSAVDCEDQISELETILDSQIYTIEDRTEMDVHVP 267

Query: 133 LATEVKRYYDHNFFLHEELKKKLEDSWSKFNELLVNKQSSLPS 5
            A E+ ++YD       ++K K+E SWSKF+  L++ Q S+ S
Sbjct: 268 SAREICKFYDIAQLYSSDIKSKIEASWSKFDASLLSLQGSIQS 310


>ref|XP_003523657.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Glycine max]
          Length = 1671

 Score =  115 bits (287), Expect = 5e-24
 Identities = 60/100 (60%), Positives = 71/100 (71%)
 Frame = -3

Query: 313 EFYHKCGNKPKIFGMTASPVVRKGVSSTMDCEEQISTLESLLDSKAYTIEDRSELQIFVP 134
           EFYH+   KPKIFGMTASPV +KGVSSTMDCE+QIS LES+LDS+ YT+EDR+E+   VP
Sbjct: 212 EFYHQANEKPKIFGMTASPVGKKGVSSTMDCEDQISELESILDSQRYTVEDRTEMDRCVP 271

Query: 133 LATEVKRYYDHNFFLHEELKKKLEDSWSKFNELLVNKQSS 14
            A E  RYYD   F    LK K+E    KF+ LL   QS+
Sbjct: 272 SAKESCRYYDQARFSALSLKPKIEALSFKFDALLSENQSN 311


>ref|XP_004144277.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Cucumis sativus]
          Length = 1359

 Score =  113 bits (283), Expect = 1e-23
 Identities = 55/101 (54%), Positives = 74/101 (73%)
 Frame = -3

Query: 313 EFYHKCGNKPKIFGMTASPVVRKGVSSTMDCEEQISTLESLLDSKAYTIEDRSELQIFVP 134
           EFYHK  +KPKIFGMTASPV+RKGVSS++DCE QI+ LES+LD++ Y IED+ E++I+VP
Sbjct: 185 EFYHKSDSKPKIFGMTASPVIRKGVSSSVDCECQIADLESILDAQVYAIEDKKEVEIYVP 244

Query: 133 LATEVKRYYDHNFFLHEELKKKLEDSWSKFNELLVNKQSSL 11
            A E+  +Y+       ELK K+E  W KF+  L N Q ++
Sbjct: 245 SAKEICIFYEPAMPQTMELKAKIEALWFKFDASLSNSQEAM 285


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