BLASTX nr result

ID: Cimicifuga21_contig00035333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035333
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282137.2| PREDICTED: ABC transporter B family member 1...   189   3e-46
emb|CAN81180.1| hypothetical protein VITISV_012787 [Vitis vinifera]   188   3e-46
ref|XP_002515049.1| multidrug resistance protein 1, 2, putative ...   184   5e-45
ref|XP_002316977.1| multidrug/pheromone exporter, MDR family, AB...   182   3e-44
ref|XP_002279336.2| PREDICTED: ABC transporter B family member 1...   180   1e-43

>ref|XP_002282137.2| PREDICTED: ABC transporter B family member 15-like [Vitis vinifera]
          Length = 1245

 Score =  189 bits (479), Expect = 3e-46
 Identities = 96/136 (70%), Positives = 112/136 (82%)
 Frame = -3

Query: 409  KARMAQKEGSQLASEAVVNHRTITAFTSQKRMVDLFSATLRSPQKESIKQSWFSGVTLFS 230
            KA  AQ EGSQLASEA VNHRTITAF+SQ+R++ LF AT+  P+KE+IKQSW SG  LFS
Sbjct: 848  KALKAQNEGSQLASEAAVNHRTITAFSSQQRILGLFGATMEGPKKENIKQSWISGFGLFS 907

Query: 229  SQFFTQAFTALSFWYGGRLIAQRQITAKALFQSFFILMSTGRSIAEAGSMTSDLAKGGDA 50
            SQF T A  AL++WYGGRL+    IT K LFQ+FFILMSTG++IA+AGSMTSDLAKG  A
Sbjct: 908  SQFLTTASIALTYWYGGRLMIHGLITPKHLFQAFFILMSTGKNIADAGSMTSDLAKGSRA 967

Query: 49   MRSVFAVLDRNSEIEP 2
            MRSVFA+LDR S+IEP
Sbjct: 968  MRSVFAILDRQSKIEP 983


>emb|CAN81180.1| hypothetical protein VITISV_012787 [Vitis vinifera]
          Length = 1245

 Score =  188 bits (478), Expect = 3e-46
 Identities = 96/136 (70%), Positives = 112/136 (82%)
 Frame = -3

Query: 409  KARMAQKEGSQLASEAVVNHRTITAFTSQKRMVDLFSATLRSPQKESIKQSWFSGVTLFS 230
            KA  AQ EGSQLASEA VNHRTITAF+SQ+R++ LF AT+  P+KE+IKQSW SG  LFS
Sbjct: 848  KALKAQNEGSQLASEAAVNHRTITAFSSQQRILGLFGATMEGPKKENIKQSWXSGFGLFS 907

Query: 229  SQFFTQAFTALSFWYGGRLIAQRQITAKALFQSFFILMSTGRSIAEAGSMTSDLAKGGDA 50
            SQF T A  AL++WYGGRL+    IT K LFQ+FFILMSTG++IA+AGSMTSDLAKG  A
Sbjct: 908  SQFLTTASIALTYWYGGRLMIHGLITPKHLFQAFFILMSTGKNIADAGSMTSDLAKGSRA 967

Query: 49   MRSVFAVLDRNSEIEP 2
            MRSVFA+LDR S+IEP
Sbjct: 968  MRSVFAILDRQSKIEP 983


>ref|XP_002515049.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
            gi|223546100|gb|EEF47603.1| multidrug resistance protein
            1, 2, putative [Ricinus communis]
          Length = 1271

 Score =  184 bits (468), Expect = 5e-45
 Identities = 89/136 (65%), Positives = 113/136 (83%)
 Frame = -3

Query: 409  KARMAQKEGSQLASEAVVNHRTITAFTSQKRMVDLFSATLRSPQKESIKQSWFSGVTLFS 230
            +A+ AQ EGSQLASEA++NHRTITAF+SQKR++  F   ++ P+KE+ KQSW SG  LFS
Sbjct: 874  RAQKAQTEGSQLASEAIINHRTITAFSSQKRILKFFEQAMKEPKKETTKQSWLSGFGLFS 933

Query: 229  SQFFTQAFTALSFWYGGRLIAQRQITAKALFQSFFILMSTGRSIAEAGSMTSDLAKGGDA 50
            SQF T A  A++FWYGGRL+AQ  +T+K LFQ FF+LMSTG++IA+AGSM+SDLAKG +A
Sbjct: 934  SQFLTTASVAITFWYGGRLMAQGNLTSKRLFQVFFLLMSTGKNIADAGSMSSDLAKGSNA 993

Query: 49   MRSVFAVLDRNSEIEP 2
            + SVFA+LDR SEIEP
Sbjct: 994  IISVFAILDRKSEIEP 1009


>ref|XP_002316977.1| multidrug/pheromone exporter, MDR family, ABC transporter family
            [Populus trichocarpa] gi|222860042|gb|EEE97589.1|
            multidrug/pheromone exporter, MDR family, ABC transporter
            family [Populus trichocarpa]
          Length = 1171

 Score =  182 bits (461), Expect = 3e-44
 Identities = 86/136 (63%), Positives = 113/136 (83%)
 Frame = -3

Query: 409  KARMAQKEGSQLASEAVVNHRTITAFTSQKRMVDLFSATLRSPQKESIKQSWFSGVTLFS 230
            KA+ AQ EGSQLASEAV+NHRTI AF+S+KRM++LF ATLR P++ES+K SW SG+ LF 
Sbjct: 773  KAQKAQMEGSQLASEAVINHRTIAAFSSEKRMLELFKATLRGPKEESVKHSWLSGLGLFC 832

Query: 229  SQFFTQAFTALSFWYGGRLIAQRQITAKALFQSFFILMSTGRSIAEAGSMTSDLAKGGDA 50
            SQFF  AF  L++WYGGRL+ +  IT++ LFQ+F IL+ T   IAEAGSMT+D++KGG+A
Sbjct: 833  SQFFNTAFITLTYWYGGRLLTEGLITSERLFQAFLILLFTAYVIAEAGSMTNDISKGGNA 892

Query: 49   MRSVFAVLDRNSEIEP 2
            +R++FA+LDR SEI+P
Sbjct: 893  IRTIFAILDRKSEIDP 908


>ref|XP_002279336.2| PREDICTED: ABC transporter B family member 15-like [Vitis vinifera]
          Length = 1252

 Score =  180 bits (456), Expect = 1e-43
 Identities = 90/136 (66%), Positives = 110/136 (80%)
 Frame = -3

Query: 409  KARMAQKEGSQLASEAVVNHRTITAFTSQKRMVDLFSATLRSPQKESIKQSWFSGVTLFS 230
            KAR AQKEGSQLASEA VNHRTITAF+SQ+R++ LF  +L+ P+KE++K SWFSG  LF 
Sbjct: 854  KARKAQKEGSQLASEATVNHRTITAFSSQRRILGLFKDSLKGPRKENVKLSWFSGFGLFM 913

Query: 229  SQFFTQAFTALSFWYGGRLIAQRQITAKALFQSFFILMSTGRSIAEAGSMTSDLAKGGDA 50
            +QF T A  AL+FWYGGRL+ Q  IT K LFQ+F IL  T + IA+AGSMTSDL+KG +A
Sbjct: 914  AQFLTTASMALAFWYGGRLMTQGLITPKRLFQAFLILTFTAKIIADAGSMTSDLSKGSNA 973

Query: 49   MRSVFAVLDRNSEIEP 2
            +RSVFA+LDR SEI+P
Sbjct: 974  IRSVFAILDRKSEIDP 989


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