BLASTX nr result

ID: Cimicifuga21_contig00035287 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035287
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632628.1| PREDICTED: LOW QUALITY PROTEIN: DNA replicat...    64   1e-08
emb|CBI32612.3| unnamed protein product [Vitis vinifera]               64   1e-08
ref|XP_002525183.1| DNA replication licensing factor MCM8, putat...    62   4e-08
ref|XP_004137962.1| PREDICTED: DNA helicase MCM8-like [Cucumis s...    55   5e-06

>ref|XP_003632628.1| PREDICTED: LOW QUALITY PROTEIN: DNA replication licensing factor
           MCM8-like [Vitis vinifera]
          Length = 754

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/65 (43%), Positives = 41/65 (63%)
 Frame = -3

Query: 196 IETIWPSYFPQIDFTMKDDRINLIMDLAHFFSSPSGANFVNQVRDDDDFSFLPVDFQQLR 17
           I  +  +YFP+I  +  D R+++   L HFFSSPS   FV+QV++DDD   L +DF+Q  
Sbjct: 17  ITKVLATYFPEIQLSANDPRLHVTSQLIHFFSSPSAQQFVSQVKNDDDIFSLSLDFKQFH 76

Query: 16  KTCQV 2
           K C +
Sbjct: 77  KICDL 81


>emb|CBI32612.3| unnamed protein product [Vitis vinifera]
          Length = 225

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/65 (43%), Positives = 41/65 (63%)
 Frame = -3

Query: 196 IETIWPSYFPQIDFTMKDDRINLIMDLAHFFSSPSGANFVNQVRDDDDFSFLPVDFQQLR 17
           I  +  +YFP+I  +  D R+++   L HFFSSPS   FV+QV++DDD   L +DF+Q  
Sbjct: 17  ITKVLATYFPEIQLSANDPRLHVTSQLIHFFSSPSAQQFVSQVKNDDDIFSLSLDFKQFH 76

Query: 16  KTCQV 2
           K C +
Sbjct: 77  KICDL 81


>ref|XP_002525183.1| DNA replication licensing factor MCM8, putative [Ricinus communis]
           gi|223535480|gb|EEF37149.1| DNA replication licensing
           factor MCM8, putative [Ricinus communis]
          Length = 757

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/75 (41%), Positives = 46/75 (61%)
 Frame = -3

Query: 226 QVQSSTDLNHIETIWPSYFPQIDFTMKDDRINLIMDLAHFFSSPSGANFVNQVRDDDDFS 47
           Q  +STD      I  +YFP  D T+ +D++ LI  L +FFS+  G +  +QV++++   
Sbjct: 20  QASNSTD------ILAAYFPSNDMTVDEDKLILISKLINFFSTSRGQDLASQVKEENGAL 73

Query: 46  FLPVDFQQLRKTCQV 2
           FLP+DFQQ RK C V
Sbjct: 74  FLPIDFQQFRKICDV 88


>ref|XP_004137962.1| PREDICTED: DNA helicase MCM8-like [Cucumis sativus]
          Length = 793

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
 Frame = -3

Query: 220 QSSTDLNHIETIWPSYFPQIDFTMKDDRINLIMDLAHFFSSPSGANFVNQVRDDDDFSF- 44
           Q+ +D N    I   YFP+  FT+++  +NLI  L  FFSSP+G +  +Q  DD    F 
Sbjct: 3   QAFSDFNIAGDILDLYFPRTVFTVENGWLNLISQLIFFFSSPAGRHLSSQAVDDGRGIFI 62

Query: 43  LPVDFQQLRKTC 8
           L +DFQQ RK C
Sbjct: 63  LSIDFQQFRKIC 74


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