BLASTX nr result

ID: Cimicifuga21_contig00035279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035279
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN88916.1| glutamyl tRNA Reductase [Nicotiana tabacum]           110   2e-22
emb|CBI19316.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_002285583.1| PREDICTED: glutamyl-tRNA reductase 1, chloro...   107   1e-21
ref|XP_003526522.1| PREDICTED: glutamyl-tRNA reductase 1, chloro...   105   3e-21
ref|XP_004167725.1| PREDICTED: LOW QUALITY PROTEIN: glutamyl-tRN...   105   4e-21

>emb|CAN88916.1| glutamyl tRNA Reductase [Nicotiana tabacum]
          Length = 542

 Score =  110 bits (274), Expect = 2e-22
 Identities = 52/80 (65%), Positives = 66/80 (82%)
 Frame = +3

Query: 3   SKMGDDLTMKQRKAIEDLSYRMMNKILHNPMVHLRCDRSVNKTLSTALENMHVLNRMYNL 182
           SKMGDD++ K RKA++DLS  ++NK+LH PM HLRCD S ++TLS  LENMH LNRM+NL
Sbjct: 463 SKMGDDISKKTRKAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMHALNRMFNL 522

Query: 183 ETVASILGKKVRAKVEQSQK 242
           ET  S+L +K+RAKVEQ+QK
Sbjct: 523 ETDISVLEQKIRAKVEQTQK 542


>emb|CBI19316.3| unnamed protein product [Vitis vinifera]
          Length = 510

 Score =  107 bits (266), Expect = 1e-21
 Identities = 50/80 (62%), Positives = 66/80 (82%)
 Frame = +3

Query: 3   SKMGDDLTMKQRKAIEDLSYRMMNKILHNPMVHLRCDRSVNKTLSTALENMHVLNRMYNL 182
           SKMGDD++ K R+A++DLS  ++NK+LH PM HLRCD S ++TLS  LENMH LNRM++L
Sbjct: 431 SKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMHALNRMFSL 490

Query: 183 ETVASILGKKVRAKVEQSQK 242
           ET  S+L +K+RAKVEQ+QK
Sbjct: 491 ETEISLLEQKIRAKVEQTQK 510


>ref|XP_002285583.1| PREDICTED: glutamyl-tRNA reductase 1, chloroplastic [Vitis
           vinifera] gi|147816412|emb|CAN77439.1| hypothetical
           protein VITISV_007402 [Vitis vinifera]
          Length = 545

 Score =  107 bits (266), Expect = 1e-21
 Identities = 50/80 (62%), Positives = 66/80 (82%)
 Frame = +3

Query: 3   SKMGDDLTMKQRKAIEDLSYRMMNKILHNPMVHLRCDRSVNKTLSTALENMHVLNRMYNL 182
           SKMGDD++ K R+A++DLS  ++NK+LH PM HLRCD S ++TLS  LENMH LNRM++L
Sbjct: 466 SKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMHALNRMFSL 525

Query: 183 ETVASILGKKVRAKVEQSQK 242
           ET  S+L +K+RAKVEQ+QK
Sbjct: 526 ETEISLLEQKIRAKVEQTQK 545


>ref|XP_003526522.1| PREDICTED: glutamyl-tRNA reductase 1, chloroplastic-like [Glycine
           max]
          Length = 536

 Score =  105 bits (263), Expect = 3e-21
 Identities = 49/79 (62%), Positives = 64/79 (81%)
 Frame = +3

Query: 6   KMGDDLTMKQRKAIEDLSYRMMNKILHNPMVHLRCDRSVNKTLSTALENMHVLNRMYNLE 185
           KMGDD+  K R+A++DLS  ++NK+LH PM HLRCD + ++TLS  LENMH LNRM+NLE
Sbjct: 458 KMGDDIPKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGNDSRTLSETLENMHALNRMFNLE 517

Query: 186 TVASILGKKVRAKVEQSQK 242
           T  S+L +K+RAKVEQ+QK
Sbjct: 518 TEISVLEEKIRAKVEQNQK 536


>ref|XP_004167725.1| PREDICTED: LOW QUALITY PROTEIN: glutamyl-tRNA reductase 1,
           chloroplastic-like [Cucumis sativus]
          Length = 552

 Score =  105 bits (262), Expect = 4e-21
 Identities = 49/80 (61%), Positives = 65/80 (81%)
 Frame = +3

Query: 3   SKMGDDLTMKQRKAIEDLSYRMMNKILHNPMVHLRCDRSVNKTLSTALENMHVLNRMYNL 182
           SKMGDD+  K R+A++DLS  ++NK+LH PM HLRCD S ++TLS  LENMH LNRM++L
Sbjct: 473 SKMGDDIPKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMHALNRMFSL 532

Query: 183 ETVASILGKKVRAKVEQSQK 242
           ET  ++L +K+RAKVEQ+QK
Sbjct: 533 ETEIAVLEQKIRAKVEQNQK 552


Top