BLASTX nr result

ID: Cimicifuga21_contig00035197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035197
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]   211   6e-53
emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera]   207   5e-52
emb|CAA73042.1| polyprotein [Ananas comosus]                          204   8e-51
emb|CAN61694.1| hypothetical protein VITISV_026655 [Vitis vinifera]   203   1e-50
gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gy...   203   1e-50

>emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]
          Length = 1573

 Score =  211 bits (536), Expect = 6e-53
 Identities = 100/161 (62%), Positives = 123/161 (76%)
 Frame = +3

Query: 3    SMDFVDGLPCSPWRNEAIWVIVDRLTKLAHFVLIRTNRDANGLARLYIEQIVRYHGVPRS 182
            +MDFV GLP +  +   +WVIVDRLTK AHF+ ++T    N LA+LYI++IVR HG+P S
Sbjct: 1271 TMDFVIGLPRTRSKKNGVWVIVDRLTKSAHFLAMKTTDSMNSLAKLYIQEIVRLHGIPVS 1330

Query: 183  IMSDKDPLFVSQFWQSFQRALGARLDFSTAYQPQTDDQIKRVN*ILEDLLKACVLDFEPG 362
            I+SD+DP F SQFWQS QRALG +L+FST + PQTD Q +RV  ILED+L+ACVLDF   
Sbjct: 1331 IVSDRDPKFTSQFWQSLQRALGTQLNFSTVFHPQTDGQSERVIQILEDMLRACVLDFGGN 1390

Query: 363  WEKYLPLVEFSYNNSYQSNISMASFEALYGRPC*SPSYWME 485
            W  YLPL EF+YNN YQS+I MA +EALYGRPC SP  W+E
Sbjct: 1391 WADYLPLAEFAYNNXYQSSIGMAPYEALYGRPCRSPLCWIE 1431


>emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera]
          Length = 1387

 Score =  207 bits (528), Expect = 5e-52
 Identities = 98/161 (60%), Positives = 123/161 (76%)
 Frame = +3

Query: 3    SMDFVDGLPCSPWRNEAIWVIVDRLTKLAHFVLIRTNRDANGLARLYIEQIVRYHGVPRS 182
            +MDFV GLP +  +   +W+IVDRLTK  HF+ ++T    N LA+LYI++IVR HG+P S
Sbjct: 1039 TMDFVIGLPRTRSKKNGVWMIVDRLTKSTHFLAMKTIDSMNSLAKLYIQEIVRLHGIPVS 1098

Query: 183  IMSDKDPLFVSQFWQSFQRALGARLDFSTAYQPQTDDQIKRVN*ILEDLLKACVLDFEPG 362
            I+SD+DP F SQFWQS QR LG +L+FSTA+ PQTD Q +RV  ILED+L+ACVLDF   
Sbjct: 1099 IVSDRDPKFTSQFWQSLQRTLGTQLNFSTAFHPQTDGQSERVIQILEDMLRACVLDFGGN 1158

Query: 363  WEKYLPLVEFSYNNSYQSNISMASFEALYGRPC*SPSYWME 485
            W  YLPL EF+YNNSYQS+I M ++EALYGRPC SP  W+E
Sbjct: 1159 WADYLPLAEFAYNNSYQSSIGMXTYEALYGRPCRSPLCWIE 1199


>emb|CAA73042.1| polyprotein [Ananas comosus]
          Length = 871

 Score =  204 bits (518), Expect = 8e-51
 Identities = 97/161 (60%), Positives = 123/161 (76%)
 Frame = +3

Query: 3    SMDFVDGLPCSPWRNEAIWVIVDRLTKLAHFVLIRTNRDANGLARLYIEQIVRYHGVPRS 182
            +MDFV GLP S   ++AIWVIVDRLTK AHF+ I T      LA++Y+++IVR HGVP S
Sbjct: 600  TMDFVTGLPRSQAGHDAIWVIVDRLTKSAHFIPIHTTWTGERLAQVYLDEIVRLHGVPTS 659

Query: 183  IMSDKDPLFVSQFWQSFQRALGARLDFSTAYQPQTDDQIKRVN*ILEDLLKACVLDFEPG 362
            I+SD+D  FVS FW+S Q ALG RLDFSTA+ PQ+D Q +R    LED+L+ACV+DF+ G
Sbjct: 660  IVSDRDTRFVSHFWRSLQDALGTRLDFSTAFHPQSDGQSERTIQTLEDMLRACVIDFQGG 719

Query: 363  WEKYLPLVEFSYNNSYQSNISMASFEALYGRPC*SPSYWME 485
            W ++LP+ EF+YNNSYQ++I MA FEALYGR C SP +W E
Sbjct: 720  WSQHLPMAEFAYNNSYQASIKMAPFEALYGRKCRSPLHWSE 760


>emb|CAN61694.1| hypothetical protein VITISV_026655 [Vitis vinifera]
          Length = 1313

 Score =  203 bits (517), Expect = 1e-50
 Identities = 98/161 (60%), Positives = 122/161 (75%)
 Frame = +3

Query: 3    SMDFVDGLPCSPWRNEAIWVIVDRLTKLAHFVLIRTNRDANGLARLYIEQIVRYHGVPRS 182
            +MDFV GLP +  +   +WVIVD LTK AHF+ ++T    N LA+LYI++IVR HG+  S
Sbjct: 965  TMDFVIGLPRTRSKKNGVWVIVDCLTKSAHFLAMKTTDSMNSLAKLYIQEIVRLHGILVS 1024

Query: 183  IMSDKDPLFVSQFWQSFQRALGARLDFSTAYQPQTDDQIKRVN*ILEDLLKACVLDFEPG 362
            I+SD+DP F SQFWQS QRALG +L+F+TA+ PQTD Q +RV  ILED+L+ACVLDF   
Sbjct: 1025 IVSDRDPKFTSQFWQSLQRALGTQLNFNTAFHPQTDGQSERVIQILEDMLRACVLDFGGN 1084

Query: 363  WEKYLPLVEFSYNNSYQSNISMASFEALYGRPC*SPSYWME 485
            W  YLPL EF+YNNSYQS+I  A +EALYGRPC SP  W+E
Sbjct: 1085 WADYLPLAEFAYNNSYQSSIXXAPYEALYGRPCRSPLCWIE 1125


>gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gypsy type [Oryza sativa]
            gi|21327374|gb|AAM48279.1|AC122148_32 Putative 22 kDa
            kafirin cluster; Ty3-Gypsy type [Oryza sativa Japonica
            Group] gi|31431495|gb|AAP53268.1| retrotransposon
            protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1230

 Score =  203 bits (516), Expect = 1e-50
 Identities = 93/161 (57%), Positives = 124/161 (77%)
 Frame = +3

Query: 3    SMDFVDGLPCSPWRNEAIWVIVDRLTKLAHFVLIRTNRDANGLARLYIEQIVRYHGVPRS 182
            SMDFV GLP +P  N++IWVIVDRLTK  HF+ ++ N     LA+LY+++IV  HGVP  
Sbjct: 867  SMDFVQGLPTTPAGNDSIWVIVDRLTKSTHFLPVKRNFSLKKLAKLYVKEIVSLHGVPVR 926

Query: 183  IMSDKDPLFVSQFWQSFQRALGARLDFSTAYQPQTDDQIKRVN*ILEDLLKACVLDFEPG 362
            I+SD+D  F+S+FW+S  RA G +LDFSTAY PQTD Q +RVN I+ED+L++C+L+F+  
Sbjct: 927  IVSDRDTRFLSKFWKSLHRAPGTKLDFSTAYHPQTDGQTERVNQIIEDMLRSCILEFKGS 986

Query: 363  WEKYLPLVEFSYNNSYQSNISMASFEALYGRPC*SPSYWME 485
            WE+++PL EF+YNNSYQS+I MA +EALYGR C +P  W E
Sbjct: 987  WEEFMPLAEFAYNNSYQSSIRMAPYEALYGRKCRTPVCWNE 1027


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